Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.46■□□□□ 0.71
SALL3Q9BXA9 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SALL3Q9BXA9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.46■□□□□ 0.71
SALL3Q9BXA9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.46■□□□□ 0.71
SALL3Q9BXA9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.46■□□□□ 0.71
SALL3Q9BXA9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SALL3Q9BXA9 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.46■□□□□ 0.71
SALL3Q9BXA9 AC079781.4-201ENST00000641908 219 ntBASIC19.46■□□□□ 0.71
SALL3Q9BXA9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SALL3Q9BXA9 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SALL3Q9BXA9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SALL3Q9BXA9 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.46■□□□□ 0.71
SALL3Q9BXA9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SALL3Q9BXA9 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SALL3Q9BXA9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.46■□□□□ 0.71
SALL3Q9BXA9 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 TUBB3P1-201ENST00000405796 1332 ntBASIC19.45■□□□□ 0.7
SALL3Q9BXA9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 AC025048.3-201ENST00000590609 569 ntBASIC19.45■□□□□ 0.7
SALL3Q9BXA9 AC005702.4-201ENST00000618393 416 ntBASIC19.45■□□□□ 0.7
SALL3Q9BXA9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SALL3Q9BXA9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 FO538757.1-201ENST00000623083 1397 ntBASIC19.44■□□□□ 0.7
SALL3Q9BXA9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 CETN4P-206ENST00000642099 2168 ntBASIC19.44■□□□□ 0.7
SALL3Q9BXA9 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 CNN2P2-201ENST00000443536 909 ntBASIC19.44■□□□□ 0.7
SALL3Q9BXA9 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 CNN2P3-201ENST00000450201 906 ntBASIC19.44■□□□□ 0.7
SALL3Q9BXA9 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 AC010336.2-201ENST00000564226 506 ntBASIC19.44■□□□□ 0.7
SALL3Q9BXA9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 AL589739.1-201ENST00000607720 493 ntBASIC19.44■□□□□ 0.7
SALL3Q9BXA9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 AL136317.3-201ENST00000618497 906 ntBASIC19.44■□□□□ 0.7
SALL3Q9BXA9 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 AP003680.1-201ENST00000598970 3660 ntBASIC19.44■□□□□ 0.7
SALL3Q9BXA9 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 AC127383.1-201ENST00000444697 1800 ntBASIC19.44■□□□□ 0.7
SALL3Q9BXA9 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.44■□□□□ 0.7
SALL3Q9BXA9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
SALL3Q9BXA9 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SALL3Q9BXA9 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.43■□□□□ 0.7
SALL3Q9BXA9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms