Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 AC142381.1-201ENST00000426099 345 ntBASIC11.32□□□□□ -0.6
UPK3BQ9BT76 GPS2P2-201ENST00000430745 888 ntBASIC11.32□□□□□ -0.6
UPK3BQ9BT76 RBPMS2P1-201ENST00000437762 623 ntBASIC11.32□□□□□ -0.6
UPK3BQ9BT76 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 PRYP6-201ENST00000514804 343 ntBASIC11.32□□□□□ -0.6
UPK3BQ9BT76 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 AC109322.1-201ENST00000524499 1264 ntBASIC11.32□□□□□ -0.6
UPK3BQ9BT76 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 AP001094.4-201ENST00000579008 2176 ntBASIC11.32□□□□□ -0.6
UPK3BQ9BT76 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UPK3BQ9BT76 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.31□□□□□ -0.6
UPK3BQ9BT76 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 FAM58DP-201ENST00000428076 619 ntBASIC11.31□□□□□ -0.6
UPK3BQ9BT76 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.31□□□□□ -0.6
UPK3BQ9BT76 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms