Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMOQ99835 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMOQ99835 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMOQ99835 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
SMOQ99835 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMOQ99835 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SMOQ99835 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMOQ99835 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMOQ99835 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMOQ99835 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMOQ99835 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMOQ99835 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMOQ99835 CDC14C-201ENST00000428251 1719 ntBASIC16.85■□□□□ 0.29
SMOQ99835 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMOQ99835 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMOQ99835 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMOQ99835 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.85■□□□□ 0.29
SMOQ99835 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.85■□□□□ 0.29
SMOQ99835 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.85■□□□□ 0.29
SMOQ99835 FAM207CP-201ENST00000443486 507 ntBASIC16.85■□□□□ 0.29
SMOQ99835 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.85■□□□□ 0.29
SMOQ99835 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.85■□□□□ 0.29
SMOQ99835 SPDYE18-201ENST00000510091 1050 ntBASIC16.85■□□□□ 0.29
SMOQ99835 SDHAP3-202ENST00000515467 728 ntBASIC16.85■□□□□ 0.29
SMOQ99835 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.85■□□□□ 0.29
SMOQ99835 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.85■□□□□ 0.29
SMOQ99835 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.85■□□□□ 0.29
SMOQ99835 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMOQ99835 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMOQ99835 AC004790.1-201ENST00000612686 536 ntBASIC16.85■□□□□ 0.29
SMOQ99835 AC008761.3-201ENST00000624803 892 ntBASIC16.85■□□□□ 0.29
SMOQ99835 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.85■□□□□ 0.29
SMOQ99835 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMOQ99835 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMOQ99835 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.85■□□□□ 0.29
SMOQ99835 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.85■□□□□ 0.29
SMOQ99835 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMOQ99835 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMOQ99835 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.85■□□□□ 0.29
SMOQ99835 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SMOQ99835 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.85■□□□□ 0.29
SMOQ99835 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.85■□□□□ 0.29
SMOQ99835 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.85■□□□□ 0.29
SMOQ99835 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMOQ99835 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMOQ99835 AC018892.3-201ENST00000623986 2499 ntBASIC16.85■□□□□ 0.29
SMOQ99835 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SMOQ99835 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.84■□□□□ 0.29
SMOQ99835 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.84■□□□□ 0.29
SMOQ99835 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SMOQ99835 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.84■□□□□ 0.29
SMOQ99835 AL603832.2-201ENST00000566195 2125 ntBASIC16.84■□□□□ 0.29
SMOQ99835 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.84■□□□□ 0.29
SMOQ99835 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
SMOQ99835 AC114501.2-201ENST00000439631 535 ntBASIC16.84■□□□□ 0.29
SMOQ99835 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.84■□□□□ 0.29
SMOQ99835 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SMOQ99835 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SMOQ99835 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.84■□□□□ 0.29
SMOQ99835 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.84■□□□□ 0.29
SMOQ99835 AC135586.1-201ENST00000539323 574 ntBASIC16.84■□□□□ 0.29
SMOQ99835 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.84■□□□□ 0.29
SMOQ99835 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SMOQ99835 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.84■□□□□ 0.29
SMOQ99835 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.84■□□□□ 0.29
SMOQ99835 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SMOQ99835 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 BTBD7P1-201ENST00000447253 1453 ntBASIC16.84■□□□□ 0.29
SMOQ99835 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.84■□□□□ 0.29
SMOQ99835 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.84■□□□□ 0.29
SMOQ99835 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.84■□□□□ 0.29
SMOQ99835 LINC02447-202ENST00000501888 2146 ntBASIC16.84■□□□□ 0.29
SMOQ99835 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.84■□□□□ 0.29
SMOQ99835 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.84■□□□□ 0.29
SMOQ99835 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SMOQ99835 AC024909.3-201ENST00000611513 2257 ntBASIC16.84■□□□□ 0.29
SMOQ99835 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMOQ99835 LINC02199-201ENST00000506655 2702 ntBASIC16.83■□□□□ 0.29
SMOQ99835 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SMOQ99835 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms