Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 RASA4DP-201ENST00000460726 1199 ntBASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 AC128688.1-201ENST00000487626 519 ntBASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 AC005252.3-201ENST00000623855 2258 ntBASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 AC008677.1-201ENST00000519230 1561 ntBASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3IPQ96QF0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 AC105250.1-201ENST00000509378 2057 ntBASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 C18orf15-201ENST00000623680 2534 ntBASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 HBZP1-201ENST00000354915 429 ntBASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 HLA-F-220ENST00000434407 884 ntBASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RAB3IPQ96QF0 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 MMP23A-201ENST00000234610 1017 ntBASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 TOP3BP1-201ENST00000420768 1380 ntBASIC15.81■□□□□ 0.12
RAB3IPQ96QF0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms