Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC004987.2-201ENST00000395959 1148 ntBASIC13.41□□□□□ -0.26
GAFA1Q96PS6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 AC015911.4-201ENST00000588022 1070 ntBASIC13.41□□□□□ -0.26
GAFA1Q96PS6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 RN7SL828P-201ENST00000607615 303 ntBASIC13.41□□□□□ -0.26
GAFA1Q96PS6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 LINC02199-201ENST00000506655 2702 ntBASIC13.41□□□□□ -0.26
GAFA1Q96PS6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.41□□□□□ -0.26
GAFA1Q96PS6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 BNIP3P1-202ENST00000550043 1585 ntBASIC13.41□□□□□ -0.26
GAFA1Q96PS6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.41□□□□□ -0.26
GAFA1Q96PS6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.4□□□□□ -0.26
GAFA1Q96PS6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 AL365203.3-201ENST00000609742 2057 ntBASIC13.4□□□□□ -0.26
GAFA1Q96PS6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 AC125807.1-201ENST00000483097 614 ntBASIC13.4□□□□□ -0.26
GAFA1Q96PS6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 AL133215.2-201ENST00000609242 977 ntBASIC13.4□□□□□ -0.26
GAFA1Q96PS6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
GAFA1Q96PS6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
GAFA1Q96PS6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
GAFA1Q96PS6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GAFA1Q96PS6 AC011477.6-201ENST00000604980 1927 ntBASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms