Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 AL138828.2-201ENST00000615812 383 ntBASIC16.64■□□□□ 0.25
RPRD1AQ96P16 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.64■□□□□ 0.25
RPRD1AQ96P16 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 NFIC-211ENST00000641145 8399 ntBASIC16.63■□□□□ 0.25
RPRD1AQ96P16 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 AL136982.4-201ENST00000437689 1740 ntBASIC16.63■□□□□ 0.25
RPRD1AQ96P16 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 HAUS4P1-201ENST00000406739 1145 ntBASIC16.63■□□□□ 0.25
RPRD1AQ96P16 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 AL079307.3-201ENST00000556114 283 ntBASIC16.63■□□□□ 0.25
RPRD1AQ96P16 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPRD1AQ96P16 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 BASP1P1-201ENST00000430708 665 ntBASIC16.62■□□□□ 0.25
RPRD1AQ96P16 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.62■□□□□ 0.25
RPRD1AQ96P16 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms