Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 TUBB8P12-201ENST00000308911 1335 ntBASIC18.86■□□□□ 0.61
TRIM47Q96LD4 TUBB7P-202ENST00000428444 1305 ntBASIC18.86■□□□□ 0.61
TRIM47Q96LD4 TUBB8P7-204ENST00000567960 1332 ntBASIC18.86■□□□□ 0.61
TRIM47Q96LD4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 FAM86MP-201ENST00000340703 885 ntBASIC18.86■□□□□ 0.61
TRIM47Q96LD4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 MYCLP2-201ENST00000449268 967 ntBASIC18.86■□□□□ 0.61
TRIM47Q96LD4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 COX11-210ENST00000639671 696 ntBASIC18.86■□□□□ 0.61
TRIM47Q96LD4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM47Q96LD4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 AL021920.2-201ENST00000624828 1351 ntBASIC18.85■□□□□ 0.61
TRIM47Q96LD4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 ELK1P1-201ENST00000485699 580 ntBASIC18.85■□□□□ 0.61
TRIM47Q96LD4 FAM8A2P-201ENST00000528813 1142 ntBASIC18.85■□□□□ 0.61
TRIM47Q96LD4 SNX29P1-201ENST00000548357 1007 ntBASIC18.85■□□□□ 0.61
TRIM47Q96LD4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 SRD5A3P1-201ENST00000603021 949 ntBASIC18.85■□□□□ 0.61
TRIM47Q96LD4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 AC099568.2-201ENST00000609194 695 ntBASIC18.85■□□□□ 0.61
TRIM47Q96LD4 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.85■□□□□ 0.61
TRIM47Q96LD4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM47Q96LD4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms