Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM54Q969K7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TMEM54Q969K7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM54Q969K7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM54Q969K7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM54Q969K7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM54Q969K7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM54Q969K7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
TMEM54Q969K7 SPDYE7P-202ENST00000420373 878 ntBASIC14.19□□□□□ -0.14
TMEM54Q969K7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM54Q969K7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM54Q969K7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.19□□□□□ -0.14
TMEM54Q969K7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.19□□□□□ -0.14
TMEM54Q969K7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.19□□□□□ -0.14
TMEM54Q969K7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.19□□□□□ -0.14
TMEM54Q969K7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.19□□□□□ -0.14
TMEM54Q969K7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.19□□□□□ -0.14
TMEM54Q969K7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.19□□□□□ -0.14
TMEM54Q969K7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.19□□□□□ -0.14
TMEM54Q969K7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
TMEM54Q969K7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.19□□□□□ -0.14
TMEM54Q969K7 MIR6080-201ENST00000617359 66 ntBASIC14.19□□□□□ -0.14
TMEM54Q969K7 LINC00628-201ENST00000628516 1289 ntBASIC14.19□□□□□ -0.14
TMEM54Q969K7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM54Q969K7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TMEM54Q969K7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM54Q969K7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM54Q969K7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM54Q969K7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM54Q969K7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.19□□□□□ -0.14
TMEM54Q969K7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM54Q969K7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM54Q969K7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.19□□□□□ -0.14
TMEM54Q969K7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM54Q969K7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM54Q969K7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM54Q969K7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM54Q969K7 KRT8P37-201ENST00000451609 1420 ntBASIC14.18□□□□□ -0.14
TMEM54Q969K7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM54Q969K7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM54Q969K7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM54Q969K7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 MIR4453-201ENST00000584019 89 ntBASIC14.18□□□□□ -0.14
TMEM54Q969K7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM54Q969K7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM54Q969K7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM54Q969K7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM54Q969K7 AL035456.1-201ENST00000456064 1369 ntBASIC14.18□□□□□ -0.14
TMEM54Q969K7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM54Q969K7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM54Q969K7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM54Q969K7 REXO1L1P-202ENST00000608646 1974 ntBASIC14.18□□□□□ -0.14
TMEM54Q969K7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM54Q969K7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM54Q969K7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM54Q969K7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.17□□□□□ -0.14
TMEM54Q969K7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.17□□□□□ -0.14
TMEM54Q969K7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TMEM54Q969K7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.17□□□□□ -0.14
TMEM54Q969K7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM54Q969K7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.17□□□□□ -0.14
TMEM54Q969K7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TMEM54Q969K7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.17□□□□□ -0.14
TMEM54Q969K7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM54Q969K7 AL139400.1-201ENST00000366220 510 ntBASIC14.17□□□□□ -0.14
TMEM54Q969K7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TMEM54Q969K7 TSEN15P1-201ENST00000423257 515 ntBASIC14.17□□□□□ -0.14
TMEM54Q969K7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM54Q969K7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.17□□□□□ -0.14
TMEM54Q969K7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.17□□□□□ -0.14
TMEM54Q969K7 AC109322.1-201ENST00000524499 1264 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms