Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 AL627223.1-201ENST00000416693 442 ntBASIC16.44■□□□□ 0.22
PTCD2Q8WV60 TSEN15P1-201ENST00000423257 515 ntBASIC16.44■□□□□ 0.22
PTCD2Q8WV60 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 LINC01225-203ENST00000563550 1244 ntBASIC16.44■□□□□ 0.22
PTCD2Q8WV60 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 AC112504.1-201ENST00000623415 1841 ntBASIC16.44■□□□□ 0.22
PTCD2Q8WV60 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.44■□□□□ 0.22
PTCD2Q8WV60 AC073439.1-201ENST00000624121 1774 ntBASIC16.43■□□□□ 0.22
PTCD2Q8WV60 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 RN7SKP199-201ENST00000410325 305 ntBASIC16.43■□□□□ 0.22
PTCD2Q8WV60 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 AL592309.1-201ENST00000443127 649 ntBASIC16.43■□□□□ 0.22
PTCD2Q8WV60 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 AL138918.1-201ENST00000568306 659 ntBASIC16.43■□□□□ 0.22
PTCD2Q8WV60 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 AL451064.1-201ENST00000607718 471 ntBASIC16.43■□□□□ 0.22
PTCD2Q8WV60 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.43■□□□□ 0.22
PTCD2Q8WV60 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 AL356094.1-201ENST00000624663 1212 ntBASIC16.42■□□□□ 0.22
PTCD2Q8WV60 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTCD2Q8WV60 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms