Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC22.44■■□□□ 1.18
TMC1Q8TDI8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMC1Q8TDI8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
TMC1Q8TDI8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TMC1Q8TDI8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TMC1Q8TDI8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC22.44■■□□□ 1.18
TMC1Q8TDI8 GSAP-205ENST00000430584 600 ntTSL 5 BASIC22.44■■□□□ 1.18
TMC1Q8TDI8 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC22.44■■□□□ 1.18
TMC1Q8TDI8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC22.44■■□□□ 1.18
TMC1Q8TDI8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC22.44■■□□□ 1.18
TMC1Q8TDI8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC22.44■■□□□ 1.18
TMC1Q8TDI8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
TMC1Q8TDI8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC22.44■■□□□ 1.18
TMC1Q8TDI8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC22.44■■□□□ 1.18
TMC1Q8TDI8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC22.44■■□□□ 1.18
TMC1Q8TDI8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TMC1Q8TDI8 AC004233.3-201ENST00000607794 1269 ntBASIC22.44■■□□□ 1.18
TMC1Q8TDI8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 AL512361.1-201ENST00000554200 418 ntBASIC22.43■■□□□ 1.18
TMC1Q8TDI8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 AC004840.1-201ENST00000636359 365 ntBASIC22.43■■□□□ 1.18
TMC1Q8TDI8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC22.43■■□□□ 1.18
TMC1Q8TDI8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 IMPDH1P4-201ENST00000445028 1534 ntBASIC22.42■■□□□ 1.18
TMC1Q8TDI8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 SPTLC1P1-201ENST00000447199 261 ntBASIC22.42■■□□□ 1.18
TMC1Q8TDI8 CRB3P1-201ENST00000449338 276 ntBASIC22.42■■□□□ 1.18
TMC1Q8TDI8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 AC026979.3-201ENST00000607315 403 ntBASIC22.42■■□□□ 1.18
TMC1Q8TDI8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMC1Q8TDI8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 RN7SL618P-201ENST00000477850 296 ntBASIC22.41■■□□□ 1.18
TMC1Q8TDI8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 CFL1-212ENST00000531413 636 ntTSL 3 BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC22.41■■□□□ 1.18
TMC1Q8TDI8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms