Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AP006288.1-201ENST00000446065 395 ntBASIC14.17□□□□□ -0.14
CPEB3Q8NE35 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 AC004835.2-201ENST00000603762 682 ntBASIC14.17□□□□□ -0.14
CPEB3Q8NE35 AL365330.1-201ENST00000607459 531 ntBASIC14.17□□□□□ -0.14
CPEB3Q8NE35 AL596442.2-201ENST00000610240 980 ntBASIC14.17□□□□□ -0.14
CPEB3Q8NE35 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPEB3Q8NE35 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 MIR4321-201ENST00000592276 80 ntBASIC14.16□□□□□ -0.14
CPEB3Q8NE35 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CPEB3Q8NE35 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 AC024909.3-201ENST00000611513 2257 ntBASIC14.15□□□□□ -0.14
CPEB3Q8NE35 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 AP3S2-216ENST00000617003 1561 ntBASIC14.15□□□□□ -0.14
CPEB3Q8NE35 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 KRT18P32-201ENST00000424695 1287 ntBASIC14.15□□□□□ -0.14
CPEB3Q8NE35 RPS8P6-201ENST00000426177 609 ntBASIC14.15□□□□□ -0.14
CPEB3Q8NE35 CNN2P11-201ENST00000429351 262 ntBASIC14.15□□□□□ -0.14
CPEB3Q8NE35 DNAJB3-202ENST00000449667 1266 ntBASIC14.15□□□□□ -0.14
CPEB3Q8NE35 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.15□□□□□ -0.14
CPEB3Q8NE35 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms