Protein–RNA interactions for Protein: Q8N5Y2

MSL3, Male-specific lethal 3 homolog, humanhuman

Known RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3Q8N5Y2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 HILS1-202ENST00000545329 423 ntBASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 AC092850.2-201ENST00000623821 2697 ntBASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.37■□□□□ 0.53
MSL3Q8N5Y2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 AC079776.1-201ENST00000401540 1152 ntBASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 MYCLP2-201ENST00000449268 967 ntBASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 AC093726.1-201ENST00000608064 963 ntBASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 AC074044.1-201ENST00000609673 707 ntBASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 AL109936.8-201ENST00000641772 604 ntBASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
MSL3Q8N5Y2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 ACA64.2-201ENST00000459014 129 ntBASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.35■□□□□ 0.53
MSL3Q8N5Y2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms