Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC116Q8IYX3 FOXO1B-201ENST00000504678 1527 ntBASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 AC112504.1-201ENST00000623415 1841 ntBASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 AC069224.1-201ENST00000566372 1715 ntBASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 AC112482.1-201ENST00000492080 688 ntBASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 LINC01225-203ENST00000563550 1244 ntBASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 AC010327.4-202ENST00000591484 748 ntBASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC116Q8IYX3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.27■□□□□ 0.03
CCDC116Q8IYX3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.27■□□□□ 0.03
CCDC116Q8IYX3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CCDC116Q8IYX3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC116Q8IYX3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC116Q8IYX3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC116Q8IYX3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CCDC116Q8IYX3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.27■□□□□ 0.03
CCDC116Q8IYX3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC116Q8IYX3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.27■□□□□ 0.03
CCDC116Q8IYX3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CCDC116Q8IYX3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC116Q8IYX3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.27■□□□□ 0.03
CCDC116Q8IYX3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC116Q8IYX3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 AL592309.1-201ENST00000443127 649 ntBASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 AP000842.3-202ENST00000569238 1080 ntBASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 MIR4469-201ENST00000583919 79 ntBASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 MIR4321-201ENST00000592276 80 ntBASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 UXT-AS1-201ENST00000590504 1525 ntBASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC116Q8IYX3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 FLJ16779-201ENST00000612722 7638 ntBASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CCDC116Q8IYX3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms