Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 AC104989.1-201ENST00000519711 778 ntBASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 HLA-A-202ENST00000376806 1854 ntBASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 KRT43P-201ENST00000434019 910 ntBASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 AC233724.13-201ENST00000598383 410 ntBASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 AC099398.1-201ENST00000567919 2776 ntBASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 AC018665.1-201ENST00000622927 1362 ntBASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS3Q8IXF0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 REXO1L6P-201ENST00000603433 1515 ntBASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 NKILA-202ENST00000614771 2598 ntBASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 AC074338.1-201ENST00000416825 156 ntBASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 AL442647.2-201ENST00000429864 857 ntBASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 BNIP3P42-201ENST00000454982 569 ntBASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 POU5F1P6-201ENST00000466990 990 ntBASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAS3Q8IXF0 AC243562.2-201ENST00000561247 970 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms