Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF135Q8IUD6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 AC007389.4-201ENST00000454674 793 ntBASIC17.12■□□□□ 0.33
RNF135Q8IUD6 AC104989.1-201ENST00000519711 778 ntBASIC17.12■□□□□ 0.33
RNF135Q8IUD6 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 AC021097.1-201ENST00000607902 574 ntBASIC17.12■□□□□ 0.33
RNF135Q8IUD6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF135Q8IUD6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 FAM220BP-201ENST00000377689 816 ntBASIC17.11■□□□□ 0.33
RNF135Q8IUD6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 ELK1P1-201ENST00000485699 580 ntBASIC17.11■□□□□ 0.33
RNF135Q8IUD6 PRYP6-201ENST00000514804 343 ntBASIC17.11■□□□□ 0.33
RNF135Q8IUD6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 AC044860.1-202ENST00000559481 777 ntBASIC17.11■□□□□ 0.33
RNF135Q8IUD6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RNF135Q8IUD6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF135Q8IUD6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms