Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL23A1Q86Y22 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL23A1Q86Y22 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL23A1Q86Y22 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.96■□□□□ 0.79
COL23A1Q86Y22 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL23A1Q86Y22 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19.96■□□□□ 0.79
COL23A1Q86Y22 AC092978.1-202ENST00000637590 1327 ntBASIC19.96■□□□□ 0.79
COL23A1Q86Y22 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
COL23A1Q86Y22 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.96■□□□□ 0.79
COL23A1Q86Y22 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.95■□□□□ 0.78
COL23A1Q86Y22 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 KLK3-207ENST00000595952 969 ntTSL 3 BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 AC107373.2-201ENST00000607735 490 ntBASIC19.95■□□□□ 0.78
COL23A1Q86Y22 AC006453.4-201ENST00000636949 1252 ntBASIC19.95■□□□□ 0.78
COL23A1Q86Y22 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL23A1Q86Y22 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.94■□□□□ 0.78
COL23A1Q86Y22 CYP46A4P-201ENST00000414953 267 ntBASIC19.94■□□□□ 0.78
COL23A1Q86Y22 DEF8-202ENST00000418391 852 ntTSL 2 BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 RNA5SP486-201ENST00000515961 83 ntBASIC19.94■□□□□ 0.78
COL23A1Q86Y22 AC091812.3-201ENST00000621362 345 ntBASIC19.94■□□□□ 0.78
COL23A1Q86Y22 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.94■□□□□ 0.78
COL23A1Q86Y22 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 AL390961.4-201ENST00000623958 2535 ntBASIC19.93■□□□□ 0.78
COL23A1Q86Y22 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 AC245100.5-201ENST00000452108 331 ntBASIC19.93■□□□□ 0.78
COL23A1Q86Y22 PHKG1P2-201ENST00000457537 863 ntBASIC19.93■□□□□ 0.78
COL23A1Q86Y22 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 NKG7-204ENST00000595217 816 ntTSL 2 BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 AP005019.2-201ENST00000615104 511 ntBASIC19.93■□□□□ 0.78
COL23A1Q86Y22 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms