Protein–RNA interactions for Protein: Q86US8

SMG6, Telomerase-binding protein EST1A, humanhuman

Known RBP Predictions only

Length 1,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6Q86US8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMG6Q86US8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMG6Q86US8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMG6Q86US8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMG6Q86US8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMG6Q86US8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SMG6Q86US8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMG6Q86US8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMG6Q86US8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMG6Q86US8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMG6Q86US8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMG6Q86US8 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC21.9■■□□□ 1.1
SMG6Q86US8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC21.9■■□□□ 1.1
SMG6Q86US8 COX5BP8-201ENST00000416911 349 ntBASIC21.9■■□□□ 1.1
SMG6Q86US8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMG6Q86US8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMG6Q86US8 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC21.9■■□□□ 1.1
SMG6Q86US8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC21.9■■□□□ 1.1
SMG6Q86US8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMG6Q86US8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SMG6Q86US8 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SMG6Q86US8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21.9■■□□□ 1.1
SMG6Q86US8 AC009407.1-201ENST00000568958 598 ntBASIC21.9■■□□□ 1.1
SMG6Q86US8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
SMG6Q86US8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMG6Q86US8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.9■■□□□ 1.1
SMG6Q86US8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC21.9■■□□□ 1.1
SMG6Q86US8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SMG6Q86US8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMG6Q86US8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMG6Q86US8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMG6Q86US8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMG6Q86US8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMG6Q86US8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMG6Q86US8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMG6Q86US8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMG6Q86US8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC21.9■■□□□ 1.1
SMG6Q86US8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC21.9■■□□□ 1.1
SMG6Q86US8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SMG6Q86US8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC21.9■■□□□ 1.1
SMG6Q86US8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMG6Q86US8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SMG6Q86US8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMG6Q86US8 PAUPAR-201ENST00000630360 2965 ntBASIC21.9■■□□□ 1.1
SMG6Q86US8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC21.9■■□□□ 1.1
SMG6Q86US8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMG6Q86US8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMG6Q86US8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SMG6Q86US8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
SMG6Q86US8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.89■■□□□ 1.1
SMG6Q86US8 RN7SL618P-201ENST00000477850 296 ntBASIC21.89■■□□□ 1.1
SMG6Q86US8 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
SMG6Q86US8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC21.89■■□□□ 1.1
SMG6Q86US8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC21.89■■□□□ 1.1
SMG6Q86US8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
SMG6Q86US8 AL596325.1-201ENST00000563991 1082 ntBASIC21.89■■□□□ 1.1
SMG6Q86US8 AC010336.2-201ENST00000564226 506 ntBASIC21.89■■□□□ 1.1
SMG6Q86US8 AC024267.1-201ENST00000582320 895 ntBASIC21.89■■□□□ 1.1
SMG6Q86US8 AC004790.1-201ENST00000612686 536 ntBASIC21.89■■□□□ 1.1
SMG6Q86US8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
SMG6Q86US8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMG6Q86US8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SMG6Q86US8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SMG6Q86US8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SMG6Q86US8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMG6Q86US8 AC010491.1-201ENST00000563101 2797 ntBASIC21.89■■□□□ 1.09
SMG6Q86US8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMG6Q86US8 LINC01144-201ENST00000626198 1710 ntBASIC21.89■■□□□ 1.09
SMG6Q86US8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMG6Q86US8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMG6Q86US8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMG6Q86US8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC21.89■■□□□ 1.09
SMG6Q86US8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC21.89■■□□□ 1.09
SMG6Q86US8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SMG6Q86US8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMG6Q86US8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SMG6Q86US8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMG6Q86US8 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMG6Q86US8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMG6Q86US8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
SMG6Q86US8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
SMG6Q86US8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
SMG6Q86US8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMG6Q86US8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMG6Q86US8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC21.89■■□□□ 1.09
SMG6Q86US8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC21.89■■□□□ 1.09
SMG6Q86US8 CR383656.12-201ENST00000549567 513 ntBASIC21.89■■□□□ 1.09
SMG6Q86US8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC21.89■■□□□ 1.09
SMG6Q86US8 AC140912.1-201ENST00000577171 1054 ntBASIC21.89■■□□□ 1.09
SMG6Q86US8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.89■■□□□ 1.09
SMG6Q86US8 RNA5-8SN1-201ENST00000610460 153 ntBASIC21.89■■□□□ 1.09
SMG6Q86US8 RNA5-8SN5-202ENST00000612463 153 ntBASIC21.89■■□□□ 1.09
SMG6Q86US8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMG6Q86US8 RNA5-8SN4-201ENST00000613359 153 ntBASIC21.89■■□□□ 1.09
SMG6Q86US8 RNA5-8SN5-201ENST00000619471 153 ntBASIC21.89■■□□□ 1.09
SMG6Q86US8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC21.89■■□□□ 1.09
SMG6Q86US8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC21.89■■□□□ 1.09
SMG6Q86US8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC21.88■■□□□ 1.09
SMG6Q86US8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMG6Q86US8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms