Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD3Q7Z3D4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 AL645939.2-201ENST00000427340 991 ntBASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 AC025678.2-201ENST00000562061 970 ntBASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 AC018529.1-201ENST00000613063 361 ntBASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 MIR6080-201ENST00000617359 66 ntBASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 AC093028.1-201ENST00000622998 982 ntBASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
LYSMD3Q7Z3D4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD3Q7Z3D4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 AL136379.1-201ENST00000623471 2642 ntBASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 AC008677.1-201ENST00000519230 1561 ntBASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LYSMD3Q7Z3D4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms