Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.2■□□□□ 0.5
SHC4Q6S5L8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.2■□□□□ 0.5
SHC4Q6S5L8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.2■□□□□ 0.5
SHC4Q6S5L8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.2■□□□□ 0.5
SHC4Q6S5L8 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.2■□□□□ 0.5
SHC4Q6S5L8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.2■□□□□ 0.5
SHC4Q6S5L8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHC4Q6S5L8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHC4Q6S5L8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SHC4Q6S5L8 AC092127.1-201ENST00000567093 3455 ntBASIC18.2■□□□□ 0.5
SHC4Q6S5L8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHC4Q6S5L8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
SHC4Q6S5L8 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHC4Q6S5L8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SHC4Q6S5L8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 AC105250.1-201ENST00000509378 2057 ntBASIC18.19■□□□□ 0.5
SHC4Q6S5L8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 MIR940-201ENST00000401276 94 ntBASIC18.19■□□□□ 0.5
SHC4Q6S5L8 MCCD1P2-201ENST00000423228 335 ntBASIC18.19■□□□□ 0.5
SHC4Q6S5L8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 AC009090.5-201ENST00000624886 2285 ntBASIC18.19■□□□□ 0.5
SHC4Q6S5L8 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC4Q6S5L8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 AL136982.4-201ENST00000437689 1740 ntBASIC18.18■□□□□ 0.5
SHC4Q6S5L8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 AP000842.3-202ENST00000569238 1080 ntBASIC18.18■□□□□ 0.5
SHC4Q6S5L8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.18■□□□□ 0.5
SHC4Q6S5L8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHC4Q6S5L8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 AC090616.6-203ENST00000579186 1945 ntBASIC18.17■□□□□ 0.5
SHC4Q6S5L8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms