Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 MIR943-201ENST00000401286 94 ntBASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 AC107890.1-201ENST00000422478 521 ntBASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFWD3Q6PCD5 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 TREML5P-201ENST00000421694 576 ntBASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 FO538757.1-201ENST00000623083 1397 ntBASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFWD3Q6PCD5 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RFWD3Q6PCD5 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms