Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 AP003171.2-201ENST00000528208 925 ntBASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDC42BPAQ5VT25 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDC42BPAQ5VT25 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDC42BPAQ5VT25 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDC42BPAQ5VT25 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
CDC42BPAQ5VT25 MTHFR-217ENST00000641820 1569 ntBASIC23.89■■□□□ 1.42
CDC42BPAQ5VT25 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDC42BPAQ5VT25 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDC42BPAQ5VT25 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC23.89■■□□□ 1.41
CDC42BPAQ5VT25 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
CDC42BPAQ5VT25 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDC42BPAQ5VT25 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
CDC42BPAQ5VT25 AC022188.1-201ENST00000620960 1664 ntBASIC23.89■■□□□ 1.41
CDC42BPAQ5VT25 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDC42BPAQ5VT25 AC006001.1-201ENST00000325130 474 ntBASIC23.89■■□□□ 1.41
CDC42BPAQ5VT25 ARL16-210ENST00000574938 751 ntTSL 2 BASIC23.89■■□□□ 1.41
CDC42BPAQ5VT25 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CDC42BPAQ5VT25 ECM1P1-201ENST00000604092 1279 ntBASIC23.89■■□□□ 1.41
CDC42BPAQ5VT25 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
CDC42BPAQ5VT25 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
CDC42BPAQ5VT25 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CDC42BPAQ5VT25 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDC42BPAQ5VT25 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 AC104306.2-201ENST00000451877 341 ntBASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 ACTG1P17-201ENST00000558391 1119 ntBASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 AL021578.1-201ENST00000613646 709 ntBASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 AC145423.3-201ENST00000615987 467 ntBASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 GPR39-203ENST00000622084 900 ntTSL 5 BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPAQ5VT25 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 Z93015.1-201ENST00000451718 390 ntBASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPAQ5VT25 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms