Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CBX1P83916 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX1P83916 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX1P83916 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CBX1P83916 IGHV3-52-201ENST00000519770 353 ntBASIC16.93■□□□□ 0.3
CBX1P83916 AC109462.3-201ENST00000573934 613 ntBASIC16.93■□□□□ 0.3
CBX1P83916 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 PID1-202ENST00000392054 2745 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX1P83916 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX1P83916 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX1P83916 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CBX1P83916 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX1P83916 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.93■□□□□ 0.3
CBX1P83916 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CBX1P83916 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC16.93■□□□□ 0.3
CBX1P83916 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX1P83916 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CBX1P83916 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CBX1P83916 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX1P83916 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX1P83916 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX1P83916 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CBX1P83916 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CBX1P83916 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX1P83916 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX1P83916 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CBX1P83916 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX1P83916 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.92■□□□□ 0.3
CBX1P83916 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.92■□□□□ 0.3
CBX1P83916 NIFKP9-201ENST00000419265 221 ntBASIC16.92■□□□□ 0.3
CBX1P83916 NCF1B-203ENST00000435988 1254 ntBASIC16.92■□□□□ 0.3
CBX1P83916 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CBX1P83916 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.92■□□□□ 0.3
CBX1P83916 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.92■□□□□ 0.3
CBX1P83916 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.92■□□□□ 0.3
CBX1P83916 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.92■□□□□ 0.3
CBX1P83916 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.92■□□□□ 0.3
CBX1P83916 AL138781.1-201ENST00000566567 1274 ntBASIC16.92■□□□□ 0.3
CBX1P83916 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.92■□□□□ 0.3
CBX1P83916 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.92■□□□□ 0.3
CBX1P83916 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CBX1P83916 AC092666.2-201ENST00000613287 246 ntBASIC16.92■□□□□ 0.3
CBX1P83916 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CBX1P83916 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CBX1P83916 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CBX1P83916 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CBX1P83916 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CBX1P83916 AC006277.1-201ENST00000624348 1610 ntBASIC16.92■□□□□ 0.3
CBX1P83916 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CBX1P83916 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 AC092135.3-201ENST00000624151 1846 ntBASIC16.91■□□□□ 0.3
CBX1P83916 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX1P83916 AL135999.2-201ENST00000622438 1686 ntBASIC16.91■□□□□ 0.3
CBX1P83916 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CBX1P83916 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX1P83916 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CBX1P83916 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CBX1P83916 CICP16-201ENST00000502609 2813 ntBASIC16.91■□□□□ 0.3
CBX1P83916 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX1P83916 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.91■□□□□ 0.3
CBX1P83916 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX1P83916 RPS2P4-201ENST00000476944 856 ntBASIC16.91■□□□□ 0.3
CBX1P83916 AC113404.2-201ENST00000507884 177 ntBASIC16.91■□□□□ 0.3
CBX1P83916 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX1P83916 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CBX1P83916 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.91■□□□□ 0.3
CBX1P83916 AC124016.1-201ENST00000609552 612 ntBASIC16.91■□□□□ 0.3
CBX1P83916 AL031731.1-201ENST00000642131 2094 ntBASIC16.91■□□□□ 0.3
CBX1P83916 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CBX1P83916 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CBX1P83916 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX1P83916 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX1P83916 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX1P83916 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX1P83916 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms