Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.37□□□□□ -0.27
SRPXP78539 AL591684.3-201ENST00000605187 298 ntBASIC13.37□□□□□ -0.27
SRPXP78539 AL805961.1-202ENST00000641562 540 ntBASIC13.37□□□□□ -0.27
SRPXP78539 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.37□□□□□ -0.27
SRPXP78539 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.37□□□□□ -0.27
SRPXP78539 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SRPXP78539 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
SRPXP78539 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SRPXP78539 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.36□□□□□ -0.27
SRPXP78539 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
SRPXP78539 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
SRPXP78539 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SRPXP78539 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.36□□□□□ -0.27
SRPXP78539 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.36□□□□□ -0.27
SRPXP78539 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.36□□□□□ -0.27
SRPXP78539 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.36□□□□□ -0.27
SRPXP78539 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.36□□□□□ -0.27
SRPXP78539 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SRPXP78539 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.36□□□□□ -0.27
SRPXP78539 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.36□□□□□ -0.27
SRPXP78539 RBM17P3-201ENST00000417687 1192 ntBASIC13.36□□□□□ -0.27
SRPXP78539 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.36□□□□□ -0.27
SRPXP78539 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.36□□□□□ -0.27
SRPXP78539 SLC25A6P2-201ENST00000497974 877 ntBASIC13.36□□□□□ -0.27
SRPXP78539 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.36□□□□□ -0.27
SRPXP78539 AC107918.2-201ENST00000530817 355 ntBASIC13.36□□□□□ -0.27
SRPXP78539 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SRPXP78539 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.36□□□□□ -0.27
SRPXP78539 AC012615.1-201ENST00000565797 1299 ntBASIC13.36□□□□□ -0.27
SRPXP78539 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 AP002414.4-201ENST00000589764 1148 ntBASIC13.36□□□□□ -0.27
SRPXP78539 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.36□□□□□ -0.27
SRPXP78539 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
SRPXP78539 AC021097.1-201ENST00000607902 574 ntBASIC13.36□□□□□ -0.27
SRPXP78539 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.36□□□□□ -0.27
SRPXP78539 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SRPXP78539 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.36□□□□□ -0.27
SRPXP78539 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 AP002414.2-201ENST00000591780 3365 ntBASIC13.36□□□□□ -0.27
SRPXP78539 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SRPXP78539 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.36□□□□□ -0.27
SRPXP78539 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.36□□□□□ -0.27
SRPXP78539 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.36□□□□□ -0.27
SRPXP78539 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.36□□□□□ -0.27
SRPXP78539 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.36□□□□□ -0.27
SRPXP78539 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SRPXP78539 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SRPXP78539 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.35□□□□□ -0.27
SRPXP78539 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SRPXP78539 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRPXP78539 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms