Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX6-1P78426 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.32□□□□□ -0.12
NKX6-1P78426 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.32□□□□□ -0.12
NKX6-1P78426 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX6-1P78426 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX6-1P78426 CRB3P1-201ENST00000449338 276 ntBASIC14.32□□□□□ -0.12
NKX6-1P78426 AC097493.3-201ENST00000509725 367 ntBASIC14.32□□□□□ -0.12
NKX6-1P78426 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.32□□□□□ -0.12
NKX6-1P78426 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.32□□□□□ -0.12
NKX6-1P78426 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.32□□□□□ -0.12
NKX6-1P78426 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX6-1P78426 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX6-1P78426 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX6-1P78426 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX6-1P78426 AC016027.1-202ENST00000607927 1699 ntBASIC14.32□□□□□ -0.12
NKX6-1P78426 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.32□□□□□ -0.12
NKX6-1P78426 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.32□□□□□ -0.12
NKX6-1P78426 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.32□□□□□ -0.12
NKX6-1P78426 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.32□□□□□ -0.12
NKX6-1P78426 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-1P78426 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX6-1P78426 AL136379.1-201ENST00000623471 2642 ntBASIC14.31□□□□□ -0.12
NKX6-1P78426 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NKX6-1P78426 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
NKX6-1P78426 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NKX6-1P78426 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
NKX6-1P78426 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
NKX6-1P78426 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
NKX6-1P78426 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX6-1P78426 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.31□□□□□ -0.12
NKX6-1P78426 SPDYE14P-201ENST00000442619 822 ntBASIC14.31□□□□□ -0.12
NKX6-1P78426 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX6-1P78426 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.31□□□□□ -0.12
NKX6-1P78426 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NKX6-1P78426 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX6-1P78426 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX6-1P78426 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX6-1P78426 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NKX6-1P78426 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-1P78426 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-1P78426 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-1P78426 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-1P78426 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-1P78426 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.3□□□□□ -0.12
NKX6-1P78426 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX6-1P78426 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-1P78426 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-1P78426 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX6-1P78426 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.3□□□□□ -0.12
NKX6-1P78426 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-1P78426 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-1P78426 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
NKX6-1P78426 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NKX6-1P78426 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-1P78426 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX6-1P78426 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-1P78426 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-1P78426 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.3□□□□□ -0.12
NKX6-1P78426 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX6-1P78426 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX6-1P78426 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.3□□□□□ -0.12
NKX6-1P78426 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.3□□□□□ -0.12
NKX6-1P78426 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-1P78426 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.3□□□□□ -0.12
NKX6-1P78426 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX6-1P78426 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms