Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
YBX1P67809 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.75■□□□□ 0.11
YBX1P67809 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.75■□□□□ 0.11
YBX1P67809 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.75■□□□□ 0.11
YBX1P67809 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 POU5F1P6-201ENST00000466990 990 ntBASIC15.75■□□□□ 0.11
YBX1P67809 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.75■□□□□ 0.11
YBX1P67809 KRT8P23-201ENST00000560090 1207 ntBASIC15.75■□□□□ 0.11
YBX1P67809 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
YBX1P67809 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 SPTSSB-204ENST00000617024 1292 ntBASIC15.75■□□□□ 0.11
YBX1P67809 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
YBX1P67809 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
YBX1P67809 U82695.1-201ENST00000635752 1889 ntBASIC15.75■□□□□ 0.11
YBX1P67809 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.75■□□□□ 0.11
YBX1P67809 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
YBX1P67809 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.75■□□□□ 0.11
YBX1P67809 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.75■□□□□ 0.11
YBX1P67809 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
YBX1P67809 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.74■□□□□ 0.11
YBX1P67809 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
YBX1P67809 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.74■□□□□ 0.11
YBX1P67809 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
YBX1P67809 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
YBX1P67809 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.74■□□□□ 0.11
YBX1P67809 AP003680.1-201ENST00000598970 3660 ntBASIC15.74■□□□□ 0.11
YBX1P67809 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.74■□□□□ 0.11
YBX1P67809 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.74■□□□□ 0.11
YBX1P67809 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.74■□□□□ 0.11
YBX1P67809 RBPMS2P1-201ENST00000437762 623 ntBASIC15.74■□□□□ 0.11
YBX1P67809 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
YBX1P67809 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.74■□□□□ 0.11
YBX1P67809 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.74■□□□□ 0.11
YBX1P67809 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.74■□□□□ 0.11
YBX1P67809 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.74■□□□□ 0.11
YBX1P67809 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.74■□□□□ 0.11
YBX1P67809 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 AC009093.7-201ENST00000623853 1223 ntBASIC15.74■□□□□ 0.11
YBX1P67809 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.74■□□□□ 0.11
YBX1P67809 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
YBX1P67809 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 AP3S2-216ENST00000617003 1561 ntBASIC15.74■□□□□ 0.11
YBX1P67809 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
YBX1P67809 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.74■□□□□ 0.11
YBX1P67809 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
YBX1P67809 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.74■□□□□ 0.11
YBX1P67809 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.74■□□□□ 0.11
YBX1P67809 TNRC18P2-201ENST00000417666 2714 ntBASIC15.74■□□□□ 0.11
YBX1P67809 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.74■□□□□ 0.11
YBX1P67809 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 AL592424.1-201ENST00000563624 1536 ntBASIC15.73■□□□□ 0.11
YBX1P67809 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.73■□□□□ 0.11
YBX1P67809 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.73■□□□□ 0.11
YBX1P67809 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
YBX1P67809 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.73■□□□□ 0.11
YBX1P67809 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms