Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S1P61966 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP1S1P61966 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
AP1S1P61966 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.22■□□□□ 0.19
AP1S1P61966 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
AP1S1P61966 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
AP1S1P61966 AC134407.2-201ENST00000625089 1978 ntBASIC16.22■□□□□ 0.19
AP1S1P61966 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.22■□□□□ 0.19
AP1S1P61966 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 KRT8P37-201ENST00000451609 1420 ntBASIC16.22■□□□□ 0.19
AP1S1P61966 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.22■□□□□ 0.19
AP1S1P61966 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.22■□□□□ 0.19
AP1S1P61966 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.22■□□□□ 0.19
AP1S1P61966 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.22■□□□□ 0.19
AP1S1P61966 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.22■□□□□ 0.19
AP1S1P61966 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
AP1S1P61966 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.22■□□□□ 0.19
AP1S1P61966 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.22■□□□□ 0.19
AP1S1P61966 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.22■□□□□ 0.19
AP1S1P61966 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.22■□□□□ 0.19
AP1S1P61966 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.22■□□□□ 0.19
AP1S1P61966 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.22■□□□□ 0.19
AP1S1P61966 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.22■□□□□ 0.19
AP1S1P61966 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.22■□□□□ 0.19
AP1S1P61966 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
AP1S1P61966 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
AP1S1P61966 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP1S1P61966 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S1P61966 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S1P61966 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.21■□□□□ 0.19
AP1S1P61966 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S1P61966 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S1P61966 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S1P61966 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S1P61966 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S1P61966 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S1P61966 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S1P61966 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.21■□□□□ 0.19
AP1S1P61966 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S1P61966 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
AP1S1P61966 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S1P61966 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S1P61966 FO393414.2-201ENST00000405153 598 ntBASIC16.21■□□□□ 0.19
AP1S1P61966 AC241585.1-201ENST00000433527 519 ntBASIC16.21■□□□□ 0.19
AP1S1P61966 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.21■□□□□ 0.19
AP1S1P61966 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
AP1S1P61966 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S1P61966 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.21■□□□□ 0.19
AP1S1P61966 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.21■□□□□ 0.19
AP1S1P61966 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.21■□□□□ 0.19
AP1S1P61966 AC005498.2-205ENST00000593218 784 ntBASIC16.21■□□□□ 0.19
AP1S1P61966 AL390955.2-201ENST00000603032 514 ntBASIC16.21■□□□□ 0.19
AP1S1P61966 AL390754.1-201ENST00000619088 582 ntBASIC16.21■□□□□ 0.19
AP1S1P61966 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S1P61966 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S1P61966 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP1S1P61966 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
AP1S1P61966 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.21■□□□□ 0.19
AP1S1P61966 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
AP1S1P61966 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.18
AP1S1P61966 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
AP1S1P61966 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
AP1S1P61966 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.21■□□□□ 0.18
AP1S1P61966 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
AP1S1P61966 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
AP1S1P61966 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
AP1S1P61966 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.2■□□□□ 0.18
AP1S1P61966 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 AC100757.3-201ENST00000622361 1406 ntBASIC16.2■□□□□ 0.18
AP1S1P61966 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
AP1S1P61966 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
AP1S1P61966 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.2■□□□□ 0.18
AP1S1P61966 CDC14C-201ENST00000428251 1719 ntBASIC16.2■□□□□ 0.18
AP1S1P61966 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.2■□□□□ 0.18
AP1S1P61966 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP1S1P61966 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.2■□□□□ 0.18
AP1S1P61966 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.2■□□□□ 0.18
AP1S1P61966 BASP1P1-201ENST00000430708 665 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms