Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.55□□□□□ -0.08
VBP1P61758 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
VBP1P61758 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
VBP1P61758 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.55□□□□□ -0.08
VBP1P61758 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.55□□□□□ -0.08
VBP1P61758 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.55□□□□□ -0.08
VBP1P61758 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
VBP1P61758 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VBP1P61758 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
VBP1P61758 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
VBP1P61758 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.54□□□□□ -0.08
VBP1P61758 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
VBP1P61758 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.54□□□□□ -0.08
VBP1P61758 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
VBP1P61758 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
VBP1P61758 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.54□□□□□ -0.08
VBP1P61758 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.54□□□□□ -0.08
VBP1P61758 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.54□□□□□ -0.08
VBP1P61758 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.54□□□□□ -0.08
VBP1P61758 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.54□□□□□ -0.08
VBP1P61758 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.54□□□□□ -0.08
VBP1P61758 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.54□□□□□ -0.08
VBP1P61758 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.54□□□□□ -0.08
VBP1P61758 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.54□□□□□ -0.08
VBP1P61758 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.54□□□□□ -0.08
VBP1P61758 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
VBP1P61758 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.54□□□□□ -0.08
VBP1P61758 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.54□□□□□ -0.08
VBP1P61758 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
VBP1P61758 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.54□□□□□ -0.08
VBP1P61758 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.54□□□□□ -0.08
VBP1P61758 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
VBP1P61758 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.54□□□□□ -0.08
VBP1P61758 AC010327.5-201ENST00000586923 3061 ntBASIC14.54□□□□□ -0.08
VBP1P61758 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 AC092127.1-201ENST00000567093 3455 ntBASIC14.54□□□□□ -0.08
VBP1P61758 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VBP1P61758 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VBP1P61758 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.53□□□□□ -0.08
VBP1P61758 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 LINC01230-201ENST00000625222 3017 ntBASIC14.53□□□□□ -0.08
VBP1P61758 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
VBP1P61758 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.53□□□□□ -0.08
VBP1P61758 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.53□□□□□ -0.08
VBP1P61758 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 AJ011931.1-201ENST00000618749 2492 ntBASIC14.53□□□□□ -0.08
VBP1P61758 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
VBP1P61758 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
VBP1P61758 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
VBP1P61758 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.53□□□□□ -0.08
VBP1P61758 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms