Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.24□□□□□ -0.13
UBE2NP61088 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.24□□□□□ -0.13
UBE2NP61088 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
UBE2NP61088 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
UBE2NP61088 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
UBE2NP61088 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
UBE2NP61088 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
UBE2NP61088 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.24□□□□□ -0.13
UBE2NP61088 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
UBE2NP61088 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
UBE2NP61088 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
UBE2NP61088 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
UBE2NP61088 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.24□□□□□ -0.13
UBE2NP61088 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.24□□□□□ -0.13
UBE2NP61088 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.24□□□□□ -0.13
UBE2NP61088 AC125807.1-201ENST00000483097 614 ntBASIC14.24□□□□□ -0.13
UBE2NP61088 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.24□□□□□ -0.13
UBE2NP61088 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.24□□□□□ -0.13
UBE2NP61088 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.24□□□□□ -0.13
UBE2NP61088 AC026979.3-201ENST00000607315 403 ntBASIC14.24□□□□□ -0.13
UBE2NP61088 AC106028.4-201ENST00000614509 607 ntBASIC14.24□□□□□ -0.13
UBE2NP61088 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.24□□□□□ -0.13
UBE2NP61088 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.24□□□□□ -0.13
UBE2NP61088 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.24□□□□□ -0.13
UBE2NP61088 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2NP61088 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
UBE2NP61088 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
UBE2NP61088 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.24□□□□□ -0.13
UBE2NP61088 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
UBE2NP61088 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.23□□□□□ -0.13
UBE2NP61088 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.23□□□□□ -0.13
UBE2NP61088 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 TUBB3P1-201ENST00000405796 1332 ntBASIC14.23□□□□□ -0.13
UBE2NP61088 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
UBE2NP61088 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
UBE2NP61088 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
UBE2NP61088 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UBE2NP61088 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.23□□□□□ -0.13
UBE2NP61088 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.23□□□□□ -0.13
UBE2NP61088 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.23□□□□□ -0.13
UBE2NP61088 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.23□□□□□ -0.13
UBE2NP61088 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.23□□□□□ -0.13
UBE2NP61088 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.23□□□□□ -0.13
UBE2NP61088 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.23□□□□□ -0.13
UBE2NP61088 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.23□□□□□ -0.13
UBE2NP61088 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
UBE2NP61088 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.23□□□□□ -0.13
UBE2NP61088 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.23□□□□□ -0.13
UBE2NP61088 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.23□□□□□ -0.13
UBE2NP61088 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.23□□□□□ -0.13
UBE2NP61088 AL592424.1-201ENST00000563624 1536 ntBASIC14.23□□□□□ -0.13
UBE2NP61088 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.23□□□□□ -0.13
UBE2NP61088 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UBE2NP61088 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
UBE2NP61088 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2NP61088 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
UBE2NP61088 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.23□□□□□ -0.13
UBE2NP61088 REXO1L8P-201ENST00000604378 1897 ntBASIC14.23□□□□□ -0.13
UBE2NP61088 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms