Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.42□□□□□ -0.1
GFRA1P56159 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
GFRA1P56159 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.42□□□□□ -0.1
GFRA1P56159 AC114501.2-201ENST00000439631 535 ntBASIC14.42□□□□□ -0.1
GFRA1P56159 SPTLC1P1-201ENST00000447199 261 ntBASIC14.42□□□□□ -0.1
GFRA1P56159 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.42□□□□□ -0.1
GFRA1P56159 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.42□□□□□ -0.1
GFRA1P56159 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.42□□□□□ -0.1
GFRA1P56159 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.42□□□□□ -0.1
GFRA1P56159 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 AC135586.1-201ENST00000539323 574 ntBASIC14.42□□□□□ -0.1
GFRA1P56159 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.42□□□□□ -0.1
GFRA1P56159 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.42□□□□□ -0.1
GFRA1P56159 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.42□□□□□ -0.1
GFRA1P56159 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
GFRA1P56159 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
GFRA1P56159 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.42□□□□□ -0.1
GFRA1P56159 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
GFRA1P56159 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GFRA1P56159 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.41□□□□□ -0.1
GFRA1P56159 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.41□□□□□ -0.1
GFRA1P56159 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.41□□□□□ -0.1
GFRA1P56159 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.41□□□□□ -0.1
GFRA1P56159 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
GFRA1P56159 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.41□□□□□ -0.1
GFRA1P56159 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 AC084018.2-201ENST00000613093 2607 ntBASIC14.41□□□□□ -0.1
GFRA1P56159 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
GFRA1P56159 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.41□□□□□ -0.1
GFRA1P56159 AZGP1P1-201ENST00000411909 902 ntBASIC14.41□□□□□ -0.1
GFRA1P56159 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.41□□□□□ -0.1
GFRA1P56159 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.41□□□□□ -0.1
GFRA1P56159 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.41□□□□□ -0.1
GFRA1P56159 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.41□□□□□ -0.1
GFRA1P56159 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
GFRA1P56159 AC025048.3-201ENST00000590609 569 ntBASIC14.41□□□□□ -0.1
GFRA1P56159 AC005702.4-201ENST00000618393 416 ntBASIC14.41□□□□□ -0.1
GFRA1P56159 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.41□□□□□ -0.1
GFRA1P56159 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.41□□□□□ -0.1
GFRA1P56159 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
GFRA1P56159 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
GFRA1P56159 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.41□□□□□ -0.1
GFRA1P56159 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.41□□□□□ -0.1
GFRA1P56159 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 AC079328.2-201ENST00000561241 3354 ntBASIC14.41□□□□□ -0.1
GFRA1P56159 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.41□□□□□ -0.1
GFRA1P56159 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
GFRA1P56159 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.41□□□□□ -0.1
GFRA1P56159 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.41□□□□□ -0.1
GFRA1P56159 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.41□□□□□ -0.1
GFRA1P56159 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.41□□□□□ -0.1
GFRA1P56159 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.41□□□□□ -0.1
GFRA1P56159 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.41□□□□□ -0.1
GFRA1P56159 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GFRA1P56159 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GFRA1P56159 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.4□□□□□ -0.1
GFRA1P56159 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.4□□□□□ -0.1
GFRA1P56159 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
GFRA1P56159 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms