Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SH3BGRP55822 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 AL391256.1-201ENST00000443260 1855 ntBASIC15.52■□□□□ 0.08
SH3BGRP55822 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SH3BGRP55822 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.52■□□□□ 0.08
SH3BGRP55822 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
SH3BGRP55822 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.52■□□□□ 0.08
SH3BGRP55822 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.52■□□□□ 0.08
SH3BGRP55822 AC106881.1-201ENST00000605849 3329 ntBASIC15.52■□□□□ 0.08
SH3BGRP55822 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.52■□□□□ 0.08
SH3BGRP55822 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.52■□□□□ 0.08
SH3BGRP55822 MYCLP1-201ENST00000372451 1075 ntBASIC15.52■□□□□ 0.08
SH3BGRP55822 RCN1P2-201ENST00000398357 915 ntBASIC15.52■□□□□ 0.08
SH3BGRP55822 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.52■□□□□ 0.08
SH3BGRP55822 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.52■□□□□ 0.08
SH3BGRP55822 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
SH3BGRP55822 AC111152.3-201ENST00000569699 673 ntBASIC15.52■□□□□ 0.08
SH3BGRP55822 MIR5100-201ENST00000579544 119 ntBASIC15.52■□□□□ 0.08
SH3BGRP55822 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.52■□□□□ 0.08
SH3BGRP55822 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SH3BGRP55822 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SH3BGRP55822 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SH3BGRP55822 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.52■□□□□ 0.08
SH3BGRP55822 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
SH3BGRP55822 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.52■□□□□ 0.07
SH3BGRP55822 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
SH3BGRP55822 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.52■□□□□ 0.07
SH3BGRP55822 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SH3BGRP55822 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SH3BGRP55822 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.52■□□□□ 0.07
SH3BGRP55822 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SH3BGRP55822 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.52■□□□□ 0.07
SH3BGRP55822 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
SH3BGRP55822 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SH3BGRP55822 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SH3BGRP55822 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SH3BGRP55822 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.52■□□□□ 0.07
SH3BGRP55822 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.52■□□□□ 0.07
SH3BGRP55822 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
SH3BGRP55822 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
SH3BGRP55822 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.52■□□□□ 0.07
SH3BGRP55822 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SH3BGRP55822 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SH3BGRP55822 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
SH3BGRP55822 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SH3BGRP55822 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SH3BGRP55822 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.51■□□□□ 0.07
SH3BGRP55822 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SH3BGRP55822 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SH3BGRP55822 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SH3BGRP55822 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SH3BGRP55822 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SH3BGRP55822 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SH3BGRP55822 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SH3BGRP55822 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SH3BGRP55822 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SH3BGRP55822 BEND3P1-201ENST00000421591 1944 ntBASIC15.51■□□□□ 0.07
SH3BGRP55822 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.51■□□□□ 0.07
SH3BGRP55822 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SH3BGRP55822 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.51■□□□□ 0.07
SH3BGRP55822 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SH3BGRP55822 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SH3BGRP55822 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SH3BGRP55822 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SH3BGRP55822 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SH3BGRP55822 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
SH3BGRP55822 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SH3BGRP55822 AC005104.2-201ENST00000427818 678 ntBASIC15.51■□□□□ 0.07
SH3BGRP55822 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.51■□□□□ 0.07
SH3BGRP55822 IGHV3-52-201ENST00000519770 353 ntBASIC15.51■□□□□ 0.07
SH3BGRP55822 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SH3BGRP55822 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.51■□□□□ 0.07
SH3BGRP55822 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.51■□□□□ 0.07
SH3BGRP55822 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SH3BGRP55822 AL691432.3-201ENST00000621860 400 ntBASIC15.51■□□□□ 0.07
SH3BGRP55822 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.51■□□□□ 0.07
SH3BGRP55822 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SH3BGRP55822 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SH3BGRP55822 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
SH3BGRP55822 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SH3BGRP55822 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
SH3BGRP55822 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms