Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 BCAR1-209ENST00000546196 1340 ntBASIC15.85■□□□□ 0.13
CDH13P55290 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CDH13P55290 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 CICP13-201ENST00000422015 2789 ntBASIC15.85■□□□□ 0.13
CDH13P55290 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CDH13P55290 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH13P55290 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CDH13P55290 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH13P55290 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH13P55290 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH13P55290 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH13P55290 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
CDH13P55290 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH13P55290 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH13P55290 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH13P55290 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH13P55290 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH13P55290 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH13P55290 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH13P55290 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CDH13P55290 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH13P55290 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH13P55290 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH13P55290 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CDH13P55290 HAUS4P1-201ENST00000406739 1145 ntBASIC15.84■□□□□ 0.13
CDH13P55290 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH13P55290 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH13P55290 KRT18P2-201ENST00000447938 1258 ntBASIC15.84■□□□□ 0.13
CDH13P55290 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH13P55290 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.84■□□□□ 0.13
CDH13P55290 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH13P55290 AC079776.4-201ENST00000511039 504 ntBASIC15.84■□□□□ 0.13
CDH13P55290 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.84■□□□□ 0.13
CDH13P55290 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH13P55290 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH13P55290 AL662844.1-201ENST00000546340 181 ntBASIC15.84■□□□□ 0.13
CDH13P55290 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.84■□□□□ 0.13
CDH13P55290 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.84■□□□□ 0.13
CDH13P55290 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CDH13P55290 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH13P55290 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH13P55290 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH13P55290 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH13P55290 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH13P55290 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CDH13P55290 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH13P55290 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH13P55290 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH13P55290 AC104109.2-201ENST00000602919 1418 ntBASIC15.84■□□□□ 0.13
CDH13P55290 PPT1-215ENST00000641471 2368 ntBASIC15.84■□□□□ 0.13
CDH13P55290 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH13P55290 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH13P55290 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.83■□□□□ 0.13
CDH13P55290 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH13P55290 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH13P55290 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CDH13P55290 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH13P55290 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.83■□□□□ 0.13
CDH13P55290 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH13P55290 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH13P55290 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH13P55290 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH13P55290 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH13P55290 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH13P55290 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH13P55290 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH13P55290 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH13P55290 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH13P55290 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CDH13P55290 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH13P55290 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH13P55290 AC140658.5-201ENST00000438532 169 ntBASIC15.83■□□□□ 0.12
CDH13P55290 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.83■□□□□ 0.12
CDH13P55290 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CDH13P55290 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH13P55290 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CDH13P55290 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CDH13P55290 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH13P55290 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH13P55290 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH13P55290 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH13P55290 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH13P55290 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH13P55290 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH13P55290 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH13P55290 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH13P55290 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH13P55290 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH13P55290 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH13P55290 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH13P55290 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH13P55290 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH13P55290 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CDH13P55290 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms