Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 MIR6805-201ENST00000615055 62 ntBASIC17.32■□□□□ 0.36
VCPP55072 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
VCPP55072 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.32■□□□□ 0.36
VCPP55072 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.32■□□□□ 0.36
VCPP55072 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCPP55072 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
VCPP55072 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCPP55072 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.32■□□□□ 0.36
VCPP55072 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
VCPP55072 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCPP55072 AL512652.2-201ENST00000625156 1716 ntBASIC17.32■□□□□ 0.36
VCPP55072 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCPP55072 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCPP55072 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCPP55072 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.32■□□□□ 0.36
VCPP55072 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCPP55072 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCPP55072 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
VCPP55072 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VCPP55072 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.32■□□□□ 0.36
VCPP55072 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
VCPP55072 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VCPP55072 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCPP55072 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.31■□□□□ 0.36
VCPP55072 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCPP55072 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.31■□□□□ 0.36
VCPP55072 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.31■□□□□ 0.36
VCPP55072 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCPP55072 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.31■□□□□ 0.36
VCPP55072 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.31■□□□□ 0.36
VCPP55072 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.31■□□□□ 0.36
VCPP55072 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VCPP55072 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCPP55072 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
VCPP55072 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCPP55072 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCPP55072 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.31■□□□□ 0.36
VCPP55072 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.31■□□□□ 0.36
VCPP55072 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.31■□□□□ 0.36
VCPP55072 INE1-201ENST00000456273 945 ntBASIC17.31■□□□□ 0.36
VCPP55072 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.31■□□□□ 0.36
VCPP55072 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.31■□□□□ 0.36
VCPP55072 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.31■□□□□ 0.36
VCPP55072 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.31■□□□□ 0.36
VCPP55072 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VCPP55072 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCPP55072 CYP2A7P1-201ENST00000595391 815 ntBASIC17.31■□□□□ 0.36
VCPP55072 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.31■□□□□ 0.36
VCPP55072 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
VCPP55072 AL161645.1-201ENST00000622716 1255 ntBASIC17.31■□□□□ 0.36
VCPP55072 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.31■□□□□ 0.36
VCPP55072 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCPP55072 AC022188.1-201ENST00000620960 1664 ntBASIC17.31■□□□□ 0.36
VCPP55072 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.31■□□□□ 0.36
VCPP55072 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCPP55072 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VCPP55072 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.31■□□□□ 0.36
VCPP55072 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.31■□□□□ 0.36
VCPP55072 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCPP55072 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
VCPP55072 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCPP55072 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VCPP55072 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
VCPP55072 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VCPP55072 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCPP55072 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
VCPP55072 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.31■□□□□ 0.36
VCPP55072 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VCPP55072 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VCPP55072 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.3■□□□□ 0.36
VCPP55072 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VCPP55072 AL162727.3-201ENST00000635661 2787 ntBASIC17.3■□□□□ 0.36
VCPP55072 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCPP55072 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.3■□□□□ 0.36
VCPP55072 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCPP55072 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCPP55072 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
VCPP55072 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VCPP55072 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VCPP55072 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCPP55072 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCPP55072 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCPP55072 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCPP55072 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCPP55072 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VCPP55072 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCPP55072 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
VCPP55072 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.3■□□□□ 0.36
VCPP55072 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VCPP55072 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.3■□□□□ 0.36
VCPP55072 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.3■□□□□ 0.36
VCPP55072 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.3■□□□□ 0.36
VCPP55072 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.3■□□□□ 0.36
VCPP55072 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
VCPP55072 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.3■□□□□ 0.36
VCPP55072 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
VCPP55072 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCPP55072 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
VCPP55072 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCPP55072 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms