Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUBP1P53384 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUBP1P53384 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUBP1P53384 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUBP1P53384 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.13■□□□□ 0.17
NUBP1P53384 LIPK-201ENST00000404190 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUBP1P53384 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC16.13■□□□□ 0.17
NUBP1P53384 MTCO2P17-201ENST00000424336 677 ntBASIC16.13■□□□□ 0.17
NUBP1P53384 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC16.13■□□□□ 0.17
NUBP1P53384 CCDC58-205ENST00000479899 545 ntTSL 3 BASIC16.13■□□□□ 0.17
NUBP1P53384 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUBP1P53384 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NUBP1P53384 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NUBP1P53384 CARD8-224ENST00000522431 622 ntTSL 2 BASIC16.13■□□□□ 0.17
NUBP1P53384 RSF1-IT1-201ENST00000528233 632 ntTSL 2 BASIC16.13■□□□□ 0.17
NUBP1P53384 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUBP1P53384 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.13■□□□□ 0.17
NUBP1P53384 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.13■□□□□ 0.17
NUBP1P53384 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.13■□□□□ 0.17
NUBP1P53384 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.13■□□□□ 0.17
NUBP1P53384 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUBP1P53384 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.13■□□□□ 0.17
NUBP1P53384 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NUBP1P53384 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC16.13■□□□□ 0.17
NUBP1P53384 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUBP1P53384 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.13■□□□□ 0.17
NUBP1P53384 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.13■□□□□ 0.17
NUBP1P53384 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.13■□□□□ 0.17
NUBP1P53384 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.13■□□□□ 0.17
NUBP1P53384 FRMD8P1-201ENST00000440433 1524 ntBASIC16.13■□□□□ 0.17
NUBP1P53384 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUBP1P53384 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
NUBP1P53384 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
NUBP1P53384 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUBP1P53384 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUBP1P53384 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUBP1P53384 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
NUBP1P53384 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUBP1P53384 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NUBP1P53384 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.12■□□□□ 0.17
NUBP1P53384 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NUBP1P53384 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.12■□□□□ 0.17
NUBP1P53384 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.12■□□□□ 0.17
NUBP1P53384 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NUBP1P53384 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.12■□□□□ 0.17
NUBP1P53384 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUBP1P53384 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NUBP1P53384 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUBP1P53384 VN1R66P-201ENST00000412929 916 ntBASIC16.12■□□□□ 0.17
NUBP1P53384 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC16.12■□□□□ 0.17
NUBP1P53384 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC16.12■□□□□ 0.17
NUBP1P53384 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC16.12■□□□□ 0.17
NUBP1P53384 VN1R110P-201ENST00000438988 971 ntBASIC16.12■□□□□ 0.17
NUBP1P53384 VDAC1P12-201ENST00000451853 882 ntBASIC16.12■□□□□ 0.17
NUBP1P53384 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.12■□□□□ 0.17
NUBP1P53384 AC089999.1-201ENST00000460336 374 ntBASIC16.12■□□□□ 0.17
NUBP1P53384 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NUBP1P53384 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.12■□□□□ 0.17
NUBP1P53384 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NUBP1P53384 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.12■□□□□ 0.17
NUBP1P53384 LINC01490-201ENST00000548705 638 ntTSL 3 BASIC16.12■□□□□ 0.17
NUBP1P53384 HNRNPUP1-201ENST00000554987 333 ntBASIC16.12■□□□□ 0.17
NUBP1P53384 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC16.12■□□□□ 0.17
NUBP1P53384 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NUBP1P53384 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.12■□□□□ 0.17
NUBP1P53384 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NUBP1P53384 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC16.12■□□□□ 0.17
NUBP1P53384 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.12■□□□□ 0.17
NUBP1P53384 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC16.12■□□□□ 0.17
NUBP1P53384 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.12■□□□□ 0.17
NUBP1P53384 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NUBP1P53384 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
NUBP1P53384 TUBB8P12-201ENST00000308911 1335 ntBASIC16.12■□□□□ 0.17
NUBP1P53384 TUBB7P-202ENST00000428444 1305 ntBASIC16.12■□□□□ 0.17
NUBP1P53384 TUBB8P7-204ENST00000567960 1332 ntBASIC16.12■□□□□ 0.17
NUBP1P53384 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUBP1P53384 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
NUBP1P53384 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
NUBP1P53384 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUBP1P53384 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.11■□□□□ 0.17
NUBP1P53384 NIFK-AS1-202ENST00000414554 1411 ntTSL 2 BASIC16.11■□□□□ 0.17
NUBP1P53384 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUBP1P53384 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUBP1P53384 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.11■□□□□ 0.17
NUBP1P53384 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NUBP1P53384 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.11■□□□□ 0.17
NUBP1P53384 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUBP1P53384 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
NUBP1P53384 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUBP1P53384 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUBP1P53384 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NUBP1P53384 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NUBP1P53384 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
NUBP1P53384 ACKR1-201ENST00000368121 1240 ntBASIC16.11■□□□□ 0.17
NUBP1P53384 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC16.11■□□□□ 0.17
NUBP1P53384 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NUBP1P53384 USP9YP28-201ENST00000435142 589 ntBASIC16.11■□□□□ 0.17
NUBP1P53384 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC16.11■□□□□ 0.17
NUBP1P53384 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.11■□□□□ 0.17
NUBP1P53384 RAB28P2-201ENST00000454299 641 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms