Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SSR1P43307 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.29■□□□□ 0.36
SSR1P43307 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.29■□□□□ 0.36
SSR1P43307 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.29■□□□□ 0.36
SSR1P43307 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
SSR1P43307 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSR1P43307 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSR1P43307 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.28■□□□□ 0.36
SSR1P43307 AC024909.3-201ENST00000611513 2257 ntBASIC17.28■□□□□ 0.36
SSR1P43307 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSR1P43307 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSR1P43307 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSR1P43307 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSR1P43307 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSR1P43307 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.28■□□□□ 0.36
SSR1P43307 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SSR1P43307 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SSR1P43307 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.28■□□□□ 0.36
SSR1P43307 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSR1P43307 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SSR1P43307 HCG4B-203ENST00000450128 991 ntBASIC17.28■□□□□ 0.36
SSR1P43307 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSR1P43307 IGHV3-22-201ENST00000520721 359 ntBASIC17.28■□□□□ 0.36
SSR1P43307 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
SSR1P43307 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.28■□□□□ 0.36
SSR1P43307 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SSR1P43307 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.28■□□□□ 0.36
SSR1P43307 Z83851.2-201ENST00000609564 659 ntBASIC17.28■□□□□ 0.36
SSR1P43307 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SSR1P43307 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.28■□□□□ 0.36
SSR1P43307 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
SSR1P43307 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSR1P43307 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSR1P43307 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SSR1P43307 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSR1P43307 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSR1P43307 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.28■□□□□ 0.36
SSR1P43307 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.28■□□□□ 0.36
SSR1P43307 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSR1P43307 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSR1P43307 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSR1P43307 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSR1P43307 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SSR1P43307 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSR1P43307 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSR1P43307 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSR1P43307 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
SSR1P43307 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.27■□□□□ 0.36
SSR1P43307 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSR1P43307 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSR1P43307 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSR1P43307 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
SSR1P43307 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
SSR1P43307 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SSR1P43307 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSR1P43307 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSR1P43307 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSR1P43307 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSR1P43307 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.27■□□□□ 0.36
SSR1P43307 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.27■□□□□ 0.36
SSR1P43307 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.27■□□□□ 0.36
SSR1P43307 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SSR1P43307 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSR1P43307 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSR1P43307 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSR1P43307 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SSR1P43307 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.27■□□□□ 0.35
SSR1P43307 AC104109.2-201ENST00000602919 1418 ntBASIC17.27■□□□□ 0.35
SSR1P43307 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SSR1P43307 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.27■□□□□ 0.35
SSR1P43307 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SSR1P43307 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SSR1P43307 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SSR1P43307 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.27■□□□□ 0.35
SSR1P43307 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SSR1P43307 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.27■□□□□ 0.35
SSR1P43307 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSR1P43307 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSR1P43307 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR1P43307 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR1P43307 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SSR1P43307 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR1P43307 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR1P43307 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.26■□□□□ 0.35
SSR1P43307 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.26■□□□□ 0.35
SSR1P43307 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SSR1P43307 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
SSR1P43307 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSR1P43307 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR1P43307 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.26■□□□□ 0.35
SSR1P43307 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSR1P43307 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SSR1P43307 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SSR1P43307 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms