Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.77■□□□□ 0.43
HTTP42858 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HTTP42858 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTTP42858 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.76■□□□□ 0.43
HTTP42858 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.76■□□□□ 0.43
HTTP42858 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.76■□□□□ 0.43
HTTP42858 RN7SL736P-201ENST00000613111 269 ntBASIC17.76■□□□□ 0.43
HTTP42858 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.76■□□□□ 0.43
HTTP42858 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.76■□□□□ 0.43
HTTP42858 AC134407.2-201ENST00000625089 1978 ntBASIC17.76■□□□□ 0.43
HTTP42858 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HTTP42858 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTTP42858 AC005622.1-201ENST00000636801 1703 ntBASIC17.76■□□□□ 0.43
HTTP42858 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTTP42858 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HTTP42858 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HTTP42858 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.76■□□□□ 0.43
HTTP42858 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTTP42858 MIR769-201ENST00000390225 118 ntBASIC17.76■□□□□ 0.43
HTTP42858 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.76■□□□□ 0.43
HTTP42858 KRT18P43-201ENST00000469825 1281 ntBASIC17.76■□□□□ 0.43
HTTP42858 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.76■□□□□ 0.43
HTTP42858 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.76■□□□□ 0.43
HTTP42858 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HTTP42858 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HTTP42858 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTTP42858 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
HTTP42858 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HTTP42858 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTTP42858 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.76■□□□□ 0.43
HTTP42858 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.76■□□□□ 0.43
HTTP42858 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
HTTP42858 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.76■□□□□ 0.43
HTTP42858 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.76■□□□□ 0.43
HTTP42858 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.76■□□□□ 0.43
HTTP42858 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.76■□□□□ 0.43
HTTP42858 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.76■□□□□ 0.43
HTTP42858 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.76■□□□□ 0.43
HTTP42858 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.76■□□□□ 0.43
HTTP42858 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HTTP42858 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HTTP42858 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.75■□□□□ 0.43
HTTP42858 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.75■□□□□ 0.43
HTTP42858 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HTTP42858 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.75■□□□□ 0.43
HTTP42858 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.75■□□□□ 0.43
HTTP42858 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.75■□□□□ 0.43
HTTP42858 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17.75■□□□□ 0.43
HTTP42858 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HTTP42858 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HTTP42858 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
HTTP42858 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HTTP42858 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HTTP42858 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.75■□□□□ 0.43
HTTP42858 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
HTTP42858 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HTTP42858 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HTTP42858 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HTTP42858 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.75■□□□□ 0.43
HTTP42858 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HTTP42858 COX5BP1-201ENST00000507622 393 ntBASIC17.75■□□□□ 0.43
HTTP42858 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.75■□□□□ 0.43
HTTP42858 AC093813.1-201ENST00000605066 256 ntBASIC17.75■□□□□ 0.43
HTTP42858 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HTTP42858 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
HTTP42858 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HTTP42858 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
HTTP42858 BNIP3P1-202ENST00000550043 1585 ntBASIC17.75■□□□□ 0.43
HTTP42858 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.75■□□□□ 0.43
HTTP42858 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HTTP42858 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HTTP42858 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HTTP42858 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
HTTP42858 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.74■□□□□ 0.43
HTTP42858 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HTTP42858 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HTTP42858 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HTTP42858 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.74■□□□□ 0.43
HTTP42858 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.74■□□□□ 0.43
HTTP42858 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HTTP42858 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HTTP42858 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HTTP42858 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HTTP42858 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HTTP42858 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HTTP42858 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HTTP42858 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.74■□□□□ 0.43
HTTP42858 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HTTP42858 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.74■□□□□ 0.43
HTTP42858 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HTTP42858 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HTTP42858 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HTTP42858 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HTTP42858 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
HTTP42858 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HTTP42858 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HTTP42858 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.74■□□□□ 0.43
HTTP42858 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC17.74■□□□□ 0.43
HTTP42858 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HTTP42858 AC005730.2-201ENST00000564549 1184 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms