Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.73■□□□□ 0.11
HNF4AP41235 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HNF4AP41235 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.73■□□□□ 0.11
HNF4AP41235 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.73■□□□□ 0.11
HNF4AP41235 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HNF4AP41235 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HNF4AP41235 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HNF4AP41235 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HNF4AP41235 CDC14C-201ENST00000428251 1719 ntBASIC15.73■□□□□ 0.11
HNF4AP41235 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.73■□□□□ 0.11
HNF4AP41235 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
HNF4AP41235 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.73■□□□□ 0.11
HNF4AP41235 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HNF4AP41235 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HNF4AP41235 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HNF4AP41235 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HNF4AP41235 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HNF4AP41235 AL589702.1-201ENST00000641229 1509 ntBASIC15.73■□□□□ 0.11
HNF4AP41235 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HNF4AP41235 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HNF4AP41235 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HNF4AP41235 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.72■□□□□ 0.11
HNF4AP41235 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.72■□□□□ 0.11
HNF4AP41235 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.72■□□□□ 0.11
HNF4AP41235 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
HNF4AP41235 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.72■□□□□ 0.11
HNF4AP41235 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.72■□□□□ 0.11
HNF4AP41235 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 KRT18P13-201ENST00000400056 1290 ntBASIC15.72■□□□□ 0.11
HNF4AP41235 TFAMP1-201ENST00000412727 736 ntBASIC15.72■□□□□ 0.11
HNF4AP41235 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.72■□□□□ 0.11
HNF4AP41235 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.72■□□□□ 0.11
HNF4AP41235 LINC02447-202ENST00000501888 2146 ntBASIC15.72■□□□□ 0.11
HNF4AP41235 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.72■□□□□ 0.11
HNF4AP41235 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.72■□□□□ 0.11
HNF4AP41235 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.72■□□□□ 0.11
HNF4AP41235 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.72■□□□□ 0.11
HNF4AP41235 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.72■□□□□ 0.11
HNF4AP41235 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
HNF4AP41235 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.72■□□□□ 0.11
HNF4AP41235 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HNF4AP41235 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HNF4AP41235 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.72■□□□□ 0.11
HNF4AP41235 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HNF4AP41235 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HNF4AP41235 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HNF4AP41235 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HNF4AP41235 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HNF4AP41235 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HNF4AP41235 AC069224.1-201ENST00000566372 1715 ntBASIC15.71■□□□□ 0.11
HNF4AP41235 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.71■□□□□ 0.11
HNF4AP41235 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.71■□□□□ 0.11
HNF4AP41235 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.71■□□□□ 0.11
HNF4AP41235 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
HNF4AP41235 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HNF4AP41235 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
HNF4AP41235 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HNF4AP41235 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HNF4AP41235 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HNF4AP41235 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HNF4AP41235 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HNF4AP41235 ELL2P1-201ENST00000413990 1906 ntBASIC15.71■□□□□ 0.11
HNF4AP41235 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HNF4AP41235 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HNF4AP41235 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HNF4AP41235 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HNF4AP41235 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HNF4AP41235 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.71■□□□□ 0.11
HNF4AP41235 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.71■□□□□ 0.11
HNF4AP41235 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.71■□□□□ 0.11
HNF4AP41235 MKNK2P1-201ENST00000437526 628 ntBASIC15.71■□□□□ 0.11
HNF4AP41235 SPDYE11-202ENST00000450699 704 ntBASIC15.71■□□□□ 0.11
HNF4AP41235 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.71■□□□□ 0.11
HNF4AP41235 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.71■□□□□ 0.11
HNF4AP41235 FAM86C2P-203ENST00000528684 1004 ntBASIC15.71■□□□□ 0.11
HNF4AP41235 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.71■□□□□ 0.11
HNF4AP41235 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.71■□□□□ 0.11
HNF4AP41235 AL138918.1-201ENST00000568306 659 ntBASIC15.71■□□□□ 0.11
HNF4AP41235 SPDYE9P-201ENST00000570642 692 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms