Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL15A1P39059 TUBB1P2-201ENST00000422712 1306 ntBASIC20.24■□□□□ 0.83
COL15A1P39059 TUBB1P1-201ENST00000503144 1300 ntBASIC20.24■□□□□ 0.83
COL15A1P39059 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL15A1P39059 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL15A1P39059 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.23■□□□□ 0.83
COL15A1P39059 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
COL15A1P39059 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.23■□□□□ 0.83
COL15A1P39059 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC20.23■□□□□ 0.83
COL15A1P39059 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC20.23■□□□□ 0.83
COL15A1P39059 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.23■□□□□ 0.83
COL15A1P39059 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC20.23■□□□□ 0.83
COL15A1P39059 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20.23■□□□□ 0.83
COL15A1P39059 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.23■□□□□ 0.83
COL15A1P39059 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.23■□□□□ 0.83
COL15A1P39059 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.23■□□□□ 0.83
COL15A1P39059 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC20.23■□□□□ 0.83
COL15A1P39059 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COL15A1P39059 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COL15A1P39059 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.23■□□□□ 0.83
COL15A1P39059 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL15A1P39059 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.23■□□□□ 0.83
COL15A1P39059 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
COL15A1P39059 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL15A1P39059 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.22■□□□□ 0.83
COL15A1P39059 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
COL15A1P39059 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL15A1P39059 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL15A1P39059 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL15A1P39059 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC20.22■□□□□ 0.83
COL15A1P39059 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC20.22■□□□□ 0.83
COL15A1P39059 BCRP2-202ENST00000447763 634 ntBASIC20.22■□□□□ 0.83
COL15A1P39059 BCRP6-201ENST00000510112 632 ntBASIC20.22■□□□□ 0.83
COL15A1P39059 BCRP7-201ENST00000511549 544 ntBASIC20.22■□□□□ 0.83
COL15A1P39059 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.22■□□□□ 0.83
COL15A1P39059 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC20.22■□□□□ 0.83
COL15A1P39059 RN7SL219P-201ENST00000582872 296 ntBASIC20.22■□□□□ 0.83
COL15A1P39059 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC20.22■□□□□ 0.83
COL15A1P39059 RERG-209ENST00000546331 1383 ntTSL 2 BASIC20.22■□□□□ 0.83
COL15A1P39059 BNIP3P1-202ENST00000550043 1585 ntBASIC20.22■□□□□ 0.83
COL15A1P39059 MTHFR-217ENST00000641820 1569 ntBASIC20.22■□□□□ 0.83
COL15A1P39059 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL15A1P39059 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL15A1P39059 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.22■□□□□ 0.83
COL15A1P39059 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
COL15A1P39059 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL15A1P39059 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
COL15A1P39059 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL15A1P39059 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
COL15A1P39059 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
COL15A1P39059 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
COL15A1P39059 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL15A1P39059 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL15A1P39059 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.22■□□□□ 0.83
COL15A1P39059 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
COL15A1P39059 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL15A1P39059 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL15A1P39059 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.22■□□□□ 0.83
COL15A1P39059 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.22■□□□□ 0.83
COL15A1P39059 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL15A1P39059 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
COL15A1P39059 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
COL15A1P39059 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC20.22■□□□□ 0.83
COL15A1P39059 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL15A1P39059 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL15A1P39059 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.21■□□□□ 0.83
COL15A1P39059 TOMM22P5-201ENST00000416399 439 ntBASIC20.21■□□□□ 0.83
COL15A1P39059 SOCS2P1-201ENST00000417727 557 ntBASIC20.21■□□□□ 0.83
COL15A1P39059 CSF2RBP1-201ENST00000447905 391 ntBASIC20.21■□□□□ 0.83
COL15A1P39059 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.21■□□□□ 0.83
COL15A1P39059 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL15A1P39059 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.21■□□□□ 0.83
COL15A1P39059 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC20.21■□□□□ 0.83
COL15A1P39059 AP001889.1-201ENST00000525414 633 ntBASIC20.21■□□□□ 0.83
COL15A1P39059 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC20.21■□□□□ 0.83
COL15A1P39059 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC20.21■□□□□ 0.83
COL15A1P39059 AL049840.4-201ENST00000602422 811 ntBASIC20.21■□□□□ 0.83
COL15A1P39059 MIR6787-201ENST00000616675 61 ntBASIC20.21■□□□□ 0.83
COL15A1P39059 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC20.21■□□□□ 0.83
COL15A1P39059 MIR6869-201ENST00000619434 62 ntBASIC20.21■□□□□ 0.83
COL15A1P39059 GPR182-203ENST00000622922 591 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms