Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP6P35125 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP6P35125 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP6P35125 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
USP6P35125 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP6P35125 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
USP6P35125 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
USP6P35125 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
USP6P35125 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP6P35125 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.47■■□□□ 1.03
USP6P35125 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
USP6P35125 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
USP6P35125 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
USP6P35125 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
USP6P35125 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC21.46■■□□□ 1.03
USP6P35125 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC21.46■■□□□ 1.03
USP6P35125 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
USP6P35125 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
USP6P35125 AC026954.1-201ENST00000429771 1293 ntBASIC21.46■■□□□ 1.03
USP6P35125 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC21.46■■□□□ 1.03
USP6P35125 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC21.46■■□□□ 1.03
USP6P35125 AC108725.1-201ENST00000495472 409 ntBASIC21.46■■□□□ 1.03
USP6P35125 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC21.46■■□□□ 1.03
USP6P35125 AC084346.2-201ENST00000607097 949 ntBASIC21.46■■□□□ 1.03
USP6P35125 MIR6787-201ENST00000616675 61 ntBASIC21.46■■□□□ 1.03
USP6P35125 HADH-212ENST00000638621 741 ntTSL 5 BASIC21.46■■□□□ 1.03
USP6P35125 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC21.46■■□□□ 1.03
USP6P35125 AC011676.5-201ENST00000624864 2660 ntBASIC21.46■■□□□ 1.03
USP6P35125 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP6P35125 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
USP6P35125 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
USP6P35125 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
USP6P35125 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP6P35125 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC21.46■■□□□ 1.03
USP6P35125 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP6P35125 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP6P35125 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
USP6P35125 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
USP6P35125 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC21.46■■□□□ 1.03
USP6P35125 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC21.46■■□□□ 1.03
USP6P35125 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
USP6P35125 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC21.46■■□□□ 1.03
USP6P35125 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
USP6P35125 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
USP6P35125 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
USP6P35125 GAPDHP40-201ENST00000505218 1006 ntBASIC21.46■■□□□ 1.03
USP6P35125 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
USP6P35125 AC009542.2-202ENST00000619004 1067 ntBASIC21.46■■□□□ 1.03
USP6P35125 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP6P35125 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
USP6P35125 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP6P35125 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP6P35125 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP6P35125 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP6P35125 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
USP6P35125 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC21.45■■□□□ 1.02
USP6P35125 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP6P35125 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC21.45■■□□□ 1.02
USP6P35125 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
USP6P35125 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP6P35125 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
USP6P35125 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP6P35125 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP6P35125 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP6P35125 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP6P35125 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
USP6P35125 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
USP6P35125 MIR648-201ENST00000385046 94 ntBASIC21.45■■□□□ 1.02
USP6P35125 AL133267.1-201ENST00000398220 340 ntBASIC21.45■■□□□ 1.02
USP6P35125 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
USP6P35125 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC21.45■■□□□ 1.02
USP6P35125 KRT8P44-201ENST00000441609 1350 ntBASIC21.45■■□□□ 1.02
USP6P35125 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
USP6P35125 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
USP6P35125 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC21.45■■□□□ 1.02
USP6P35125 EHF-205ENST00000527935 557 ntTSL 2 BASIC21.45■■□□□ 1.02
USP6P35125 IFT20-206ENST00000578122 834 ntTSL 2 BASIC21.45■■□□□ 1.02
USP6P35125 IFT20-208ENST00000578985 831 ntTSL 3 BASIC21.45■■□□□ 1.02
USP6P35125 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC21.45■■□□□ 1.02
USP6P35125 RHOXF1P1-202ENST00000635473 501 ntBASIC21.45■■□□□ 1.02
USP6P35125 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP6P35125 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP6P35125 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC21.44■■□□□ 1.02
USP6P35125 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP6P35125 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP6P35125 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
USP6P35125 OS9-205ENST00000413095 1660 ntTSL 2 BASIC21.44■■□□□ 1.02
USP6P35125 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC21.44■■□□□ 1.02
USP6P35125 AL133338.1-201ENST00000565695 1517 ntBASIC21.44■■□□□ 1.02
USP6P35125 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP6P35125 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP6P35125 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC21.44■■□□□ 1.02
USP6P35125 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.44■■□□□ 1.02
USP6P35125 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.44■■□□□ 1.02
USP6P35125 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC21.44■■□□□ 1.02
USP6P35125 TPO-206ENST00000382269 1155 ntTSL 5 BASIC21.44■■□□□ 1.02
USP6P35125 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC21.44■■□□□ 1.02
USP6P35125 AC016694.1-201ENST00000434179 700 ntBASIC21.44■■□□□ 1.02
USP6P35125 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP6P35125 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms