Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.08■□□□□ 0.32
CHRNA3P32297 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.08■□□□□ 0.32
CHRNA3P32297 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.08■□□□□ 0.32
CHRNA3P32297 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.08■□□□□ 0.32
CHRNA3P32297 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA3P32297 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.08■□□□□ 0.32
CHRNA3P32297 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.08■□□□□ 0.32
CHRNA3P32297 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA3P32297 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA3P32297 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA3P32297 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA3P32297 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.08■□□□□ 0.32
CHRNA3P32297 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CHRNA3P32297 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA3P32297 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA3P32297 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHRNA3P32297 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CHRNA3P32297 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CHRNA3P32297 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA3P32297 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA3P32297 DBET-201ENST00000630918 3363 ntBASIC17.07■□□□□ 0.32
CHRNA3P32297 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA3P32297 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.07■□□□□ 0.32
CHRNA3P32297 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA3P32297 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.07■□□□□ 0.32
CHRNA3P32297 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.07■□□□□ 0.32
CHRNA3P32297 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CHRNA3P32297 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA3P32297 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CHRNA3P32297 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.07■□□□□ 0.32
CHRNA3P32297 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.07■□□□□ 0.32
CHRNA3P32297 AC112191.1-201ENST00000523689 701 ntBASIC17.07■□□□□ 0.32
CHRNA3P32297 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
CHRNA3P32297 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.07■□□□□ 0.32
CHRNA3P32297 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.07■□□□□ 0.32
CHRNA3P32297 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA3P32297 AC092902.6-201ENST00000641783 218 ntBASIC17.07■□□□□ 0.32
CHRNA3P32297 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA3P32297 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA3P32297 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.07■□□□□ 0.32
CHRNA3P32297 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.07■□□□□ 0.32
CHRNA3P32297 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CHRNA3P32297 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CHRNA3P32297 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA3P32297 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.07■□□□□ 0.32
CHRNA3P32297 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA3P32297 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.07■□□□□ 0.32
CHRNA3P32297 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CHRNA3P32297 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHRNA3P32297 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CHRNA3P32297 AC013268.4-201ENST00000637413 2228 ntBASIC17.06■□□□□ 0.32
CHRNA3P32297 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
CHRNA3P32297 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHRNA3P32297 AC012569.1-201ENST00000591191 1524 ntBASIC17.06■□□□□ 0.32
CHRNA3P32297 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CHRNA3P32297 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.06■□□□□ 0.32
CHRNA3P32297 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRNA3P32297 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CHRNA3P32297 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRNA3P32297 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRNA3P32297 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.06■□□□□ 0.32
CHRNA3P32297 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRNA3P32297 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.06■□□□□ 0.32
CHRNA3P32297 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.06■□□□□ 0.32
CHRNA3P32297 HMGA1P7-201ENST00000406908 502 ntBASIC17.06■□□□□ 0.32
CHRNA3P32297 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.06■□□□□ 0.32
CHRNA3P32297 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.06■□□□□ 0.32
CHRNA3P32297 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.06■□□□□ 0.32
CHRNA3P32297 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRNA3P32297 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.06■□□□□ 0.32
CHRNA3P32297 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.06■□□□□ 0.32
CHRNA3P32297 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.06■□□□□ 0.32
CHRNA3P32297 AL596442.2-201ENST00000610240 980 ntBASIC17.06■□□□□ 0.32
CHRNA3P32297 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.06■□□□□ 0.32
CHRNA3P32297 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.06■□□□□ 0.32
CHRNA3P32297 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CHRNA3P32297 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CHRNA3P32297 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRNA3P32297 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRNA3P32297 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRNA3P32297 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
CHRNA3P32297 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRNA3P32297 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRNA3P32297 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHRNA3P32297 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHRNA3P32297 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CHRNA3P32297 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRNA3P32297 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRNA3P32297 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CHRNA3P32297 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CHRNA3P32297 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.05■□□□□ 0.32
CHRNA3P32297 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.05■□□□□ 0.32
CHRNA3P32297 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA3P32297 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CHRNA3P32297 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms