Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GDF1P27539 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GDF1P27539 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.63□□□□□ -0.07
GDF1P27539 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GDF1P27539 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.63□□□□□ -0.07
GDF1P27539 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.63□□□□□ -0.07
GDF1P27539 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.63□□□□□ -0.07
GDF1P27539 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GDF1P27539 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
GDF1P27539 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.63□□□□□ -0.07
GDF1P27539 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.63□□□□□ -0.07
GDF1P27539 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GDF1P27539 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
GDF1P27539 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.63□□□□□ -0.07
GDF1P27539 AC002472.2-201ENST00000442739 958 ntBASIC14.63□□□□□ -0.07
GDF1P27539 AC245100.5-201ENST00000452108 331 ntBASIC14.63□□□□□ -0.07
GDF1P27539 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.63□□□□□ -0.07
GDF1P27539 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.63□□□□□ -0.07
GDF1P27539 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.63□□□□□ -0.07
GDF1P27539 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.63□□□□□ -0.07
GDF1P27539 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.63□□□□□ -0.07
GDF1P27539 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.63□□□□□ -0.07
GDF1P27539 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GDF1P27539 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.63□□□□□ -0.07
GDF1P27539 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GDF1P27539 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
GDF1P27539 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GDF1P27539 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.63□□□□□ -0.07
GDF1P27539 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
GDF1P27539 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.63□□□□□ -0.07
GDF1P27539 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
GDF1P27539 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
GDF1P27539 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.62□□□□□ -0.07
GDF1P27539 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
GDF1P27539 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.62□□□□□ -0.07
GDF1P27539 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.62□□□□□ -0.07
GDF1P27539 KRT8P12-202ENST00000472924 1397 ntBASIC14.62□□□□□ -0.07
GDF1P27539 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.62□□□□□ -0.07
GDF1P27539 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
GDF1P27539 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
GDF1P27539 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
GDF1P27539 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.62□□□□□ -0.07
GDF1P27539 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.62□□□□□ -0.07
GDF1P27539 AL136982.4-201ENST00000437689 1740 ntBASIC14.62□□□□□ -0.07
GDF1P27539 FAM207CP-201ENST00000443486 507 ntBASIC14.62□□□□□ -0.07
GDF1P27539 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
GDF1P27539 RN7SL204P-201ENST00000582831 262 ntBASIC14.62□□□□□ -0.07
GDF1P27539 AC138761.1-201ENST00000584393 385 ntBASIC14.62□□□□□ -0.07
GDF1P27539 LINC02560-201ENST00000596379 459 ntBASIC14.62□□□□□ -0.07
GDF1P27539 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.62□□□□□ -0.07
GDF1P27539 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.62□□□□□ -0.07
GDF1P27539 AC009118.2-201ENST00000613275 655 ntBASIC14.62□□□□□ -0.07
GDF1P27539 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
GDF1P27539 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.62□□□□□ -0.07
GDF1P27539 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
GDF1P27539 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.62□□□□□ -0.07
GDF1P27539 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
GDF1P27539 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.62□□□□□ -0.07
GDF1P27539 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
GDF1P27539 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.61□□□□□ -0.07
GDF1P27539 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.61□□□□□ -0.07
GDF1P27539 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.61□□□□□ -0.07
GDF1P27539 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.61□□□□□ -0.07
GDF1P27539 CYP4F24P-201ENST00000586049 1580 ntBASIC14.61□□□□□ -0.07
GDF1P27539 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.61□□□□□ -0.07
GDF1P27539 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.61□□□□□ -0.07
GDF1P27539 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GDF1P27539 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.61□□□□□ -0.07
GDF1P27539 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms