Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN3P26045 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.48■□□□□ 0.23
PTPN3P26045 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN3P26045 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN3P26045 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN3P26045 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
PTPN3P26045 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.48■□□□□ 0.23
PTPN3P26045 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PTPN3P26045 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN3P26045 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
PTPN3P26045 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 AC011477.6-201ENST00000604980 1927 ntBASIC16.47■□□□□ 0.23
PTPN3P26045 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.47■□□□□ 0.23
PTPN3P26045 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
PTPN3P26045 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PTPN3P26045 HLA-H-201ENST00000383620 1096 ntBASIC16.47■□□□□ 0.23
PTPN3P26045 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PTPN3P26045 UPF3AP3-201ENST00000420996 769 ntBASIC16.47■□□□□ 0.23
PTPN3P26045 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PTPN3P26045 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.47■□□□□ 0.23
PTPN3P26045 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.47■□□□□ 0.23
PTPN3P26045 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN3P26045 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN3P26045 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.47■□□□□ 0.23
PTPN3P26045 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.47■□□□□ 0.23
PTPN3P26045 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.47■□□□□ 0.23
PTPN3P26045 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.47■□□□□ 0.23
PTPN3P26045 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
PTPN3P26045 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PTPN3P26045 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PTPN3P26045 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PTPN3P26045 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.47■□□□□ 0.23
PTPN3P26045 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PTPN3P26045 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN3P26045 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PTPN3P26045 AP3S2-216ENST00000617003 1561 ntBASIC16.47■□□□□ 0.23
PTPN3P26045 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN3P26045 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN3P26045 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN3P26045 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PTPN3P26045 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN3P26045 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN3P26045 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN3P26045 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN3P26045 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN3P26045 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN3P26045 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN3P26045 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN3P26045 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN3P26045 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN3P26045 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN3P26045 AC004461.1-201ENST00000412461 403 ntBASIC16.46■□□□□ 0.23
PTPN3P26045 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
PTPN3P26045 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN3P26045 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.46■□□□□ 0.23
PTPN3P26045 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.46■□□□□ 0.23
PTPN3P26045 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN3P26045 MIR3687-2-201ENST00000577708 61 ntBASIC16.46■□□□□ 0.23
PTPN3P26045 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
PTPN3P26045 MIR3687-1-201ENST00000614492 61 ntBASIC16.46■□□□□ 0.23
PTPN3P26045 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN3P26045 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN3P26045 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN3P26045 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN3P26045 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN3P26045 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN3P26045 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PTPN3P26045 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN3P26045 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN3P26045 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN3P26045 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN3P26045 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
PTPN3P26045 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.46■□□□□ 0.22
PTPN3P26045 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PTPN3P26045 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PTPN3P26045 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms