Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.5■□□□□ 0.71
KCNA3P22001 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KCNA3P22001 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KCNA3P22001 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KCNA3P22001 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.5■□□□□ 0.71
KCNA3P22001 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.5■□□□□ 0.71
KCNA3P22001 AC093813.1-201ENST00000605066 256 ntBASIC19.5■□□□□ 0.71
KCNA3P22001 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KCNA3P22001 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
KCNA3P22001 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KCNA3P22001 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
KCNA3P22001 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
KCNA3P22001 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KCNA3P22001 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KCNA3P22001 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KCNA3P22001 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.5■□□□□ 0.71
KCNA3P22001 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.5■□□□□ 0.71
KCNA3P22001 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KCNA3P22001 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
KCNA3P22001 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.5■□□□□ 0.71
KCNA3P22001 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
KCNA3P22001 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KCNA3P22001 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.49■□□□□ 0.71
KCNA3P22001 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KCNA3P22001 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
KCNA3P22001 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.49■□□□□ 0.71
KCNA3P22001 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.49■□□□□ 0.71
KCNA3P22001 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
KCNA3P22001 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KCNA3P22001 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.49■□□□□ 0.71
KCNA3P22001 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KCNA3P22001 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.49■□□□□ 0.71
KCNA3P22001 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.49■□□□□ 0.71
KCNA3P22001 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
KCNA3P22001 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KCNA3P22001 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KCNA3P22001 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KCNA3P22001 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KCNA3P22001 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KCNA3P22001 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.49■□□□□ 0.71
KCNA3P22001 AC136604.1-201ENST00000418535 575 ntBASIC19.49■□□□□ 0.71
KCNA3P22001 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.49■□□□□ 0.71
KCNA3P22001 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC19.49■□□□□ 0.71
KCNA3P22001 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.49■□□□□ 0.71
KCNA3P22001 AL590640.2-201ENST00000457038 527 ntBASIC19.49■□□□□ 0.71
KCNA3P22001 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KCNA3P22001 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC19.49■□□□□ 0.71
KCNA3P22001 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC19.49■□□□□ 0.71
KCNA3P22001 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KCNA3P22001 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.49■□□□□ 0.71
KCNA3P22001 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.49■□□□□ 0.71
KCNA3P22001 AC006453.4-201ENST00000636949 1252 ntBASIC19.49■□□□□ 0.71
KCNA3P22001 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KCNA3P22001 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.49■□□□□ 0.71
KCNA3P22001 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.49■□□□□ 0.71
KCNA3P22001 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KCNA3P22001 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
KCNA3P22001 AL121723.1-201ENST00000445194 1519 ntBASIC19.49■□□□□ 0.71
KCNA3P22001 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.49■□□□□ 0.71
KCNA3P22001 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
KCNA3P22001 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNA3P22001 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC19.48■□□□□ 0.71
KCNA3P22001 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNA3P22001 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNA3P22001 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.48■□□□□ 0.71
KCNA3P22001 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.48■□□□□ 0.71
KCNA3P22001 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNA3P22001 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC19.48■□□□□ 0.71
KCNA3P22001 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.48■□□□□ 0.71
KCNA3P22001 AP001582.1-201ENST00000525856 295 ntBASIC19.48■□□□□ 0.71
KCNA3P22001 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KCNA3P22001 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.48■□□□□ 0.71
KCNA3P22001 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC19.48■□□□□ 0.71
KCNA3P22001 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNA3P22001 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
KCNA3P22001 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNA3P22001 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNA3P22001 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNA3P22001 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KCNA3P22001 PP12613-201ENST00000424958 2230 ntBASIC19.48■□□□□ 0.71
KCNA3P22001 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.48■□□□□ 0.71
KCNA3P22001 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.48■□□□□ 0.71
KCNA3P22001 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
KCNA3P22001 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNA3P22001 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
KCNA3P22001 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNA3P22001 LTB4R2-202ENST00000528054 3092 ntBASIC19.48■□□□□ 0.71
KCNA3P22001 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.48■□□□□ 0.71
KCNA3P22001 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCNA3P22001 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.47■□□□□ 0.71
KCNA3P22001 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.47■□□□□ 0.71
KCNA3P22001 AC005332.8-201ENST00000622750 2735 ntBASIC19.47■□□□□ 0.71
KCNA3P22001 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCNA3P22001 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
KCNA3P22001 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.47■□□□□ 0.71
KCNA3P22001 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KCNA3P22001 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCNA3P22001 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCNA3P22001 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
KCNA3P22001 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms