Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFEP18615 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFEP18615 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.05■□□□□ 0.16
NELFEP18615 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NELFEP18615 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
NELFEP18615 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
NELFEP18615 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NELFEP18615 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NELFEP18615 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.04■□□□□ 0.16
NELFEP18615 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NELFEP18615 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 WASH6P-202ENST00000359512 1437 ntBASIC16.04■□□□□ 0.16
NELFEP18615 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.04■□□□□ 0.16
NELFEP18615 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.04■□□□□ 0.16
NELFEP18615 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
NELFEP18615 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.04■□□□□ 0.16
NELFEP18615 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.04■□□□□ 0.16
NELFEP18615 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NELFEP18615 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NELFEP18615 AC109322.1-201ENST00000524499 1264 ntBASIC16.04■□□□□ 0.16
NELFEP18615 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NELFEP18615 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.04■□□□□ 0.16
NELFEP18615 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NELFEP18615 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.04■□□□□ 0.16
NELFEP18615 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NELFEP18615 MIR4492-201ENST00000581627 80 ntBASIC16.04■□□□□ 0.16
NELFEP18615 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NELFEP18615 CYP2A7P1-201ENST00000595391 815 ntBASIC16.04■□□□□ 0.16
NELFEP18615 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.04■□□□□ 0.16
NELFEP18615 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NELFEP18615 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.04■□□□□ 0.16
NELFEP18615 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
NELFEP18615 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.04■□□□□ 0.16
NELFEP18615 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NELFEP18615 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NELFEP18615 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NELFEP18615 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NELFEP18615 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.04■□□□□ 0.16
NELFEP18615 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.03■□□□□ 0.16
NELFEP18615 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.03■□□□□ 0.16
NELFEP18615 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NELFEP18615 TUBB8P12-201ENST00000308911 1335 ntBASIC16.03■□□□□ 0.16
NELFEP18615 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 TUBB7P-202ENST00000428444 1305 ntBASIC16.03■□□□□ 0.16
NELFEP18615 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.03■□□□□ 0.16
NELFEP18615 TUBB8P7-204ENST00000567960 1332 ntBASIC16.03■□□□□ 0.16
NELFEP18615 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.03■□□□□ 0.16
NELFEP18615 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NELFEP18615 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 SPCS2P4-201ENST00000436160 681 ntBASIC16.03■□□□□ 0.16
NELFEP18615 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.03■□□□□ 0.16
NELFEP18615 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.03■□□□□ 0.16
NELFEP18615 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.03■□□□□ 0.16
NELFEP18615 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.03■□□□□ 0.16
NELFEP18615 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.03■□□□□ 0.16
NELFEP18615 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.03■□□□□ 0.16
NELFEP18615 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.03■□□□□ 0.16
NELFEP18615 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.03■□□□□ 0.16
NELFEP18615 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.03■□□□□ 0.16
NELFEP18615 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
NELFEP18615 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
NELFEP18615 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NELFEP18615 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms