Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC20.23■□□□□ 0.83
ITGB4P16144 AC105129.2-201ENST00000559536 390 ntBASIC20.23■□□□□ 0.83
ITGB4P16144 ECM1P1-201ENST00000604092 1279 ntBASIC20.23■□□□□ 0.83
ITGB4P16144 AL096828.3-201ENST00000615354 462 ntBASIC20.23■□□□□ 0.83
ITGB4P16144 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC20.23■□□□□ 0.83
ITGB4P16144 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.23■□□□□ 0.83
ITGB4P16144 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.23■□□□□ 0.83
ITGB4P16144 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITGB4P16144 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ITGB4P16144 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ITGB4P16144 AC006449.6-201ENST00000612330 2296 ntBASIC20.23■□□□□ 0.83
ITGB4P16144 AC018892.3-201ENST00000623986 2499 ntBASIC20.23■□□□□ 0.83
ITGB4P16144 AC022188.1-201ENST00000620960 1664 ntBASIC20.23■□□□□ 0.83
ITGB4P16144 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ITGB4P16144 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITGB4P16144 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITGB4P16144 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITGB4P16144 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ITGB4P16144 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC20.23■□□□□ 0.83
ITGB4P16144 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ITGB4P16144 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ITGB4P16144 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ITGB4P16144 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC20.23■□□□□ 0.83
ITGB4P16144 REEP1-202ENST00000453231 940 ntTSL 2 BASIC20.23■□□□□ 0.83
ITGB4P16144 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC20.23■□□□□ 0.83
ITGB4P16144 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITGB4P16144 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC20.23■□□□□ 0.83
ITGB4P16144 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ITGB4P16144 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC20.23■□□□□ 0.83
ITGB4P16144 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC20.23■□□□□ 0.83
ITGB4P16144 MIR4741-201ENST00000579822 90 ntBASIC20.23■□□□□ 0.83
ITGB4P16144 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC20.23■□□□□ 0.83
ITGB4P16144 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC20.23■□□□□ 0.83
ITGB4P16144 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC20.23■□□□□ 0.83
ITGB4P16144 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITGB4P16144 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITGB4P16144 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITGB4P16144 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITGB4P16144 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ITGB4P16144 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ITGB4P16144 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITGB4P16144 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
ITGB4P16144 AC106886.4-201ENST00000623557 2502 ntBASIC20.22■□□□□ 0.83
ITGB4P16144 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ITGB4P16144 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITGB4P16144 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITGB4P16144 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITGB4P16144 BTBD6P1-201ENST00000412176 1267 ntBASIC20.22■□□□□ 0.83
ITGB4P16144 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC20.22■□□□□ 0.83
ITGB4P16144 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ITGB4P16144 OARD1-212ENST00000482515 832 ntTSL 2 BASIC20.22■□□□□ 0.83
ITGB4P16144 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC20.22■□□□□ 0.83
ITGB4P16144 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
ITGB4P16144 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITGB4P16144 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC20.22■□□□□ 0.83
ITGB4P16144 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITGB4P16144 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ITGB4P16144 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC20.22■□□□□ 0.83
ITGB4P16144 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC20.22■□□□□ 0.83
ITGB4P16144 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC20.22■□□□□ 0.83
ITGB4P16144 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITGB4P16144 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC20.22■□□□□ 0.83
ITGB4P16144 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITGB4P16144 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ITGB4P16144 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.21■□□□□ 0.83
ITGB4P16144 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.21■□□□□ 0.83
ITGB4P16144 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ITGB4P16144 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ITGB4P16144 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC20.21■□□□□ 0.83
ITGB4P16144 HOMER2P2-201ENST00000451621 847 ntBASIC20.21■□□□□ 0.83
ITGB4P16144 RPSAP36-202ENST00000494591 1261 ntBASIC20.21■□□□□ 0.83
ITGB4P16144 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC20.21■□□□□ 0.83
ITGB4P16144 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.21■□□□□ 0.83
ITGB4P16144 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC20.21■□□□□ 0.83
ITGB4P16144 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC20.21■□□□□ 0.83
ITGB4P16144 AC091271.1-201ENST00000611877 1162 ntBASIC20.21■□□□□ 0.83
ITGB4P16144 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
ITGB4P16144 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ITGB4P16144 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ITGB4P16144 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ITGB4P16144 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC20.21■□□□□ 0.83
ITGB4P16144 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
ITGB4P16144 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ITGB4P16144 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ITGB4P16144 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC20.21■□□□□ 0.83
ITGB4P16144 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ITGB4P16144 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC20.2■□□□□ 0.82
ITGB4P16144 SCARNA20.5-201ENST00000516991 142 ntBASIC20.2■□□□□ 0.82
ITGB4P16144 AP006547.1-201ENST00000563435 692 ntBASIC20.2■□□□□ 0.82
ITGB4P16144 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC20.2■□□□□ 0.82
ITGB4P16144 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC20.2■□□□□ 0.82
ITGB4P16144 AC018735.1-201ENST00000437208 1502 ntBASIC20.2■□□□□ 0.82
ITGB4P16144 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ITGB4P16144 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ITGB4P16144 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
ITGB4P16144 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ITGB4P16144 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ITGB4P16144 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ITGB4P16144 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ITGB4P16144 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms