Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLUP10909 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CLUP10909 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLUP10909 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLUP10909 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLUP10909 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLUP10909 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLUP10909 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLUP10909 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.64□□□□□ -0.07
CLUP10909 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CLUP10909 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLUP10909 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLUP10909 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLUP10909 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CLUP10909 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.64□□□□□ -0.07
CLUP10909 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CLUP10909 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLUP10909 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLUP10909 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLUP10909 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLUP10909 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLUP10909 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.64□□□□□ -0.07
CLUP10909 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLUP10909 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CLUP10909 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLUP10909 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLUP10909 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLUP10909 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLUP10909 PPT1-215ENST00000641471 2368 ntBASIC14.63□□□□□ -0.07
CLUP10909 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLUP10909 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLUP10909 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CLUP10909 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLUP10909 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.63□□□□□ -0.07
CLUP10909 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.63□□□□□ -0.07
CLUP10909 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLUP10909 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLUP10909 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CLUP10909 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLUP10909 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CLUP10909 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.63□□□□□ -0.07
CLUP10909 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLUP10909 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CLUP10909 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CLUP10909 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.63□□□□□ -0.07
CLUP10909 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CLUP10909 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLUP10909 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.63□□□□□ -0.07
CLUP10909 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.63□□□□□ -0.07
CLUP10909 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.63□□□□□ -0.07
CLUP10909 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.63□□□□□ -0.07
CLUP10909 AL031055.1-201ENST00000606362 631 ntBASIC14.63□□□□□ -0.07
CLUP10909 PGM5P2-202ENST00000637225 1043 ntBASIC14.63□□□□□ -0.07
CLUP10909 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.63□□□□□ -0.07
CLUP10909 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CLUP10909 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.63□□□□□ -0.07
CLUP10909 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.63□□□□□ -0.07
CLUP10909 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLUP10909 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLUP10909 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLUP10909 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLUP10909 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.63□□□□□ -0.07
CLUP10909 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.63□□□□□ -0.07
CLUP10909 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLUP10909 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.63□□□□□ -0.07
CLUP10909 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.62□□□□□ -0.07
CLUP10909 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLUP10909 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.62□□□□□ -0.07
CLUP10909 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLUP10909 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLUP10909 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLUP10909 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.62□□□□□ -0.07
CLUP10909 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.62□□□□□ -0.07
CLUP10909 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLUP10909 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLUP10909 AC016027.1-202ENST00000607927 1699 ntBASIC14.62□□□□□ -0.07
CLUP10909 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLUP10909 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.62□□□□□ -0.07
CLUP10909 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
CLUP10909 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLUP10909 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CLUP10909 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLUP10909 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLUP10909 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLUP10909 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.62□□□□□ -0.07
CLUP10909 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.62□□□□□ -0.07
CLUP10909 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLUP10909 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.62□□□□□ -0.07
CLUP10909 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CLUP10909 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.62□□□□□ -0.07
CLUP10909 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.62□□□□□ -0.07
CLUP10909 CXCL1P1-201ENST00000502804 216 ntBASIC14.62□□□□□ -0.07
CLUP10909 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLUP10909 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CLUP10909 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CLUP10909 U82695.1-201ENST00000635752 1889 ntBASIC14.62□□□□□ -0.07
CLUP10909 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.62□□□□□ -0.07
CLUP10909 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLUP10909 AC092850.2-201ENST00000623821 2697 ntBASIC14.62□□□□□ -0.07
CLUP10909 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms