Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 AL355385.1-201ENST00000606123 409 ntBASIC17.71■□□□□ 0.43
CLTAP09496 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLTAP09496 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLTAP09496 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLTAP09496 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.71■□□□□ 0.43
CLTAP09496 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLTAP09496 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.71■□□□□ 0.43
CLTAP09496 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLTAP09496 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.71■□□□□ 0.43
CLTAP09496 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLTAP09496 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLTAP09496 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.7■□□□□ 0.42
CLTAP09496 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.7■□□□□ 0.42
CLTAP09496 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.7■□□□□ 0.42
CLTAP09496 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.7■□□□□ 0.42
CLTAP09496 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CLTAP09496 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CLTAP09496 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.7■□□□□ 0.42
CLTAP09496 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CLTAP09496 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.7■□□□□ 0.42
CLTAP09496 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.7■□□□□ 0.42
CLTAP09496 DUX4L27-201ENST00000554796 1261 ntBASIC17.7■□□□□ 0.42
CLTAP09496 AC140878.1-201ENST00000565277 250 ntBASIC17.7■□□□□ 0.42
CLTAP09496 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.7■□□□□ 0.42
CLTAP09496 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CLTAP09496 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.7■□□□□ 0.42
CLTAP09496 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.7■□□□□ 0.42
CLTAP09496 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.7■□□□□ 0.42
CLTAP09496 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CLTAP09496 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.7■□□□□ 0.42
CLTAP09496 AL592424.1-201ENST00000563624 1536 ntBASIC17.7■□□□□ 0.42
CLTAP09496 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.7■□□□□ 0.42
CLTAP09496 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLTAP09496 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.7■□□□□ 0.42
CLTAP09496 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.7■□□□□ 0.42
CLTAP09496 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLTAP09496 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
CLTAP09496 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLTAP09496 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.7■□□□□ 0.42
CLTAP09496 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLTAP09496 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CLTAP09496 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLTAP09496 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.69■□□□□ 0.42
CLTAP09496 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLTAP09496 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLTAP09496 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.69■□□□□ 0.42
CLTAP09496 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.69■□□□□ 0.42
CLTAP09496 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLTAP09496 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLTAP09496 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CLTAP09496 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.69■□□□□ 0.42
CLTAP09496 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLTAP09496 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLTAP09496 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.69■□□□□ 0.42
CLTAP09496 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CLTAP09496 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CLTAP09496 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CLTAP09496 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.69■□□□□ 0.42
CLTAP09496 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.69■□□□□ 0.42
CLTAP09496 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.69■□□□□ 0.42
CLTAP09496 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.69■□□□□ 0.42
CLTAP09496 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLTAP09496 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.69■□□□□ 0.42
CLTAP09496 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CLTAP09496 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.69■□□□□ 0.42
CLTAP09496 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.69■□□□□ 0.42
CLTAP09496 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLTAP09496 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CLTAP09496 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLTAP09496 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLTAP09496 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
CLTAP09496 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLTAP09496 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.69■□□□□ 0.42
CLTAP09496 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLTAP09496 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLTAP09496 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CLTAP09496 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLTAP09496 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CLTAP09496 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CLTAP09496 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 AL035456.1-201ENST00000456064 1369 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms