Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SLC25A39P2-201ENST00000537614 270 ntBASIC16.74■□□□□ 0.27
CD48P09326 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.74■□□□□ 0.27
CD48P09326 MIR4469-201ENST00000583919 79 ntBASIC16.74■□□□□ 0.27
CD48P09326 AC022145.2-201ENST00000598203 171 ntBASIC16.74■□□□□ 0.27
CD48P09326 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.74■□□□□ 0.27
CD48P09326 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 AC105339.1-204ENST00000636249 355 ntBASIC16.74■□□□□ 0.27
CD48P09326 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CD48P09326 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.74■□□□□ 0.27
CD48P09326 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.74■□□□□ 0.27
CD48P09326 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CD48P09326 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CD48P09326 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD48P09326 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CD48P09326 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.73■□□□□ 0.27
CD48P09326 CICP13-201ENST00000422015 2789 ntBASIC16.73■□□□□ 0.27
CD48P09326 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.73■□□□□ 0.27
CD48P09326 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD48P09326 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.73■□□□□ 0.27
CD48P09326 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CD48P09326 AC018892.3-201ENST00000623986 2499 ntBASIC16.73■□□□□ 0.27
CD48P09326 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CD48P09326 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD48P09326 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CD48P09326 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CD48P09326 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD48P09326 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD48P09326 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD48P09326 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.73■□□□□ 0.27
CD48P09326 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.73■□□□□ 0.27
CD48P09326 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.73■□□□□ 0.27
CD48P09326 AL592309.1-201ENST00000443127 649 ntBASIC16.73■□□□□ 0.27
CD48P09326 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CD48P09326 RNA5SP410-201ENST00000516285 106 ntBASIC16.73■□□□□ 0.27
CD48P09326 IGHV3-62-201ENST00000520057 340 ntBASIC16.73■□□□□ 0.27
CD48P09326 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.73■□□□□ 0.27
CD48P09326 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.73■□□□□ 0.27
CD48P09326 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.73■□□□□ 0.27
CD48P09326 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.73■□□□□ 0.27
CD48P09326 AC005829.1-201ENST00000570002 483 ntBASIC16.73■□□□□ 0.27
CD48P09326 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD48P09326 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.73■□□□□ 0.27
CD48P09326 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.73■□□□□ 0.27
CD48P09326 AC010327.4-202ENST00000591484 748 ntBASIC16.73■□□□□ 0.27
CD48P09326 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CD48P09326 UXT-AS1-201ENST00000590504 1525 ntBASIC16.73■□□□□ 0.27
CD48P09326 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD48P09326 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD48P09326 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.73■□□□□ 0.27
CD48P09326 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD48P09326 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD48P09326 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD48P09326 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD48P09326 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CD48P09326 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CD48P09326 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD48P09326 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD48P09326 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD48P09326 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CD48P09326 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.72■□□□□ 0.27
CD48P09326 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CD48P09326 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.72■□□□□ 0.27
CD48P09326 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.72■□□□□ 0.27
CD48P09326 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CD48P09326 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 FAM220BP-201ENST00000377689 816 ntBASIC16.72■□□□□ 0.27
CD48P09326 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.72■□□□□ 0.27
CD48P09326 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.72■□□□□ 0.27
CD48P09326 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.72■□□□□ 0.27
CD48P09326 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.72■□□□□ 0.27
CD48P09326 AC112482.1-201ENST00000492080 688 ntBASIC16.72■□□□□ 0.27
CD48P09326 YBX1P5-201ENST00000509441 847 ntBASIC16.72■□□□□ 0.27
CD48P09326 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.72■□□□□ 0.27
CD48P09326 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CD48P09326 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD48P09326 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms