Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.94■□□□□ 0.3
RB1P06400 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.94■□□□□ 0.3
RB1P06400 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.94■□□□□ 0.3
RB1P06400 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.94■□□□□ 0.3
RB1P06400 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.94■□□□□ 0.3
RB1P06400 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.94■□□□□ 0.3
RB1P06400 AC008687.7-202ENST00000637404 953 ntBASIC16.94■□□□□ 0.3
RB1P06400 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RB1P06400 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RB1P06400 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RB1P06400 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.94■□□□□ 0.3
RB1P06400 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
RB1P06400 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
RB1P06400 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.94■□□□□ 0.3
RB1P06400 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.94■□□□□ 0.3
RB1P06400 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RB1P06400 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RB1P06400 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RB1P06400 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RB1P06400 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RB1P06400 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RB1P06400 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.93■□□□□ 0.3
RB1P06400 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.93■□□□□ 0.3
RB1P06400 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
RB1P06400 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RB1P06400 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RB1P06400 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RB1P06400 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RB1P06400 AC004945.1-201ENST00000416738 983 ntBASIC16.93■□□□□ 0.3
RB1P06400 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RB1P06400 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.93■□□□□ 0.3
RB1P06400 AC093433.1-201ENST00000458048 571 ntBASIC16.93■□□□□ 0.3
RB1P06400 KRT8P13-201ENST00000463294 1010 ntBASIC16.93■□□□□ 0.3
RB1P06400 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.93■□□□□ 0.3
RB1P06400 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RB1P06400 RN7SL560P-201ENST00000577943 264 ntBASIC16.93■□□□□ 0.3
RB1P06400 AC243960.2-201ENST00000600996 747 ntBASIC16.93■□□□□ 0.3
RB1P06400 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.93■□□□□ 0.3
RB1P06400 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RB1P06400 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.93■□□□□ 0.3
RB1P06400 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.93■□□□□ 0.3
RB1P06400 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.93■□□□□ 0.3
RB1P06400 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RB1P06400 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RB1P06400 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RB1P06400 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RB1P06400 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RB1P06400 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RB1P06400 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 ACKR1-201ENST00000368121 1240 ntBASIC16.92■□□□□ 0.3
RB1P06400 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.92■□□□□ 0.3
RB1P06400 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.92■□□□□ 0.3
RB1P06400 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.92■□□□□ 0.3
RB1P06400 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RB1P06400 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.92■□□□□ 0.3
RB1P06400 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.92■□□□□ 0.3
RB1P06400 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.92■□□□□ 0.3
RB1P06400 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.92■□□□□ 0.3
RB1P06400 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RB1P06400 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RB1P06400 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RB1P06400 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RB1P06400 AL592424.1-201ENST00000563624 1536 ntBASIC16.91■□□□□ 0.3
RB1P06400 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.91■□□□□ 0.3
RB1P06400 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.91■□□□□ 0.3
RB1P06400 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RB1P06400 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RB1P06400 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RB1P06400 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RB1P06400 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms