Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 AL353705.2-201ENST00000428243 662 ntBASIC16.36■□□□□ 0.21
HLA-DQB2P05538 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 AL139010.1-201ENST00000454878 894 ntBASIC16.36■□□□□ 0.21
HLA-DQB2P05538 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HLA-DQB2P05538 AP003680.1-201ENST00000598970 3660 ntBASIC16.35■□□□□ 0.21
HLA-DQB2P05538 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 AP005117.1-202ENST00000581724 1908 ntBASIC16.35■□□□□ 0.21
HLA-DQB2P05538 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 HLA-J-203ENST00000494367 1087 ntBASIC16.35■□□□□ 0.21
HLA-DQB2P05538 AC105021.1-202ENST00000570572 669 ntBASIC16.35■□□□□ 0.21
HLA-DQB2P05538 MIR4453-201ENST00000584019 89 ntBASIC16.35■□□□□ 0.21
HLA-DQB2P05538 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 AC011477.6-201ENST00000604980 1927 ntBASIC16.35■□□□□ 0.21
HLA-DQB2P05538 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DQB2P05538 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.35■□□□□ 0.21
HLA-DQB2P05538 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 PRAL-201ENST00000624952 3286 ntBASIC16.34■□□□□ 0.21
HLA-DQB2P05538 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 AC026979.3-201ENST00000607315 403 ntBASIC16.34■□□□□ 0.21
HLA-DQB2P05538 AC006538.3-201ENST00000612495 578 ntBASIC16.34■□□□□ 0.21
HLA-DQB2P05538 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQB2P05538 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms