Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRAP04437 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.35□□□□□ -0.43
TCRAP04437 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.35□□□□□ -0.43
TCRAP04437 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.35□□□□□ -0.43
TCRAP04437 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.35□□□□□ -0.43
TCRAP04437 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TCRAP04437 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.35□□□□□ -0.43
TCRAP04437 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TCRAP04437 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.35□□□□□ -0.43
TCRAP04437 PCED1CP-201ENST00000419887 785 ntBASIC12.35□□□□□ -0.43
TCRAP04437 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.35□□□□□ -0.43
TCRAP04437 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.35□□□□□ -0.43
TCRAP04437 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.35□□□□□ -0.43
TCRAP04437 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.35□□□□□ -0.43
TCRAP04437 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.35□□□□□ -0.43
TCRAP04437 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
TCRAP04437 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.35□□□□□ -0.43
TCRAP04437 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.35□□□□□ -0.43
TCRAP04437 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.35□□□□□ -0.43
TCRAP04437 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TCRAP04437 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TCRAP04437 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.35□□□□□ -0.43
TCRAP04437 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TCRAP04437 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.35□□□□□ -0.43
TCRAP04437 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRAP04437 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
TCRAP04437 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TCRAP04437 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TCRAP04437 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.34□□□□□ -0.43
TCRAP04437 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRAP04437 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.34□□□□□ -0.43
TCRAP04437 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRAP04437 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.34□□□□□ -0.43
TCRAP04437 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRAP04437 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRAP04437 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRAP04437 IER3-202ENST00000376377 1350 ntBASIC12.34□□□□□ -0.43
TCRAP04437 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRAP04437 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.34□□□□□ -0.43
TCRAP04437 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.34□□□□□ -0.43
TCRAP04437 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.34□□□□□ -0.43
TCRAP04437 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRAP04437 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRAP04437 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.34□□□□□ -0.43
TCRAP04437 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.34□□□□□ -0.43
TCRAP04437 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRAP04437 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TCRAP04437 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRAP04437 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.34□□□□□ -0.43
TCRAP04437 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TCRAP04437 TMPOP1-202ENST00000424642 1267 ntBASIC12.34□□□□□ -0.43
TCRAP04437 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.34□□□□□ -0.43
TCRAP04437 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.34□□□□□ -0.43
TCRAP04437 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.34□□□□□ -0.43
TCRAP04437 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.34□□□□□ -0.43
TCRAP04437 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.34□□□□□ -0.43
TCRAP04437 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.34□□□□□ -0.43
TCRAP04437 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
TCRAP04437 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.34□□□□□ -0.43
TCRAP04437 AC138894.3-201ENST00000603787 634 ntBASIC12.34□□□□□ -0.43
TCRAP04437 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.34□□□□□ -0.43
TCRAP04437 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRAP04437 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.34□□□□□ -0.43
TCRAP04437 AC011477.6-201ENST00000604980 1927 ntBASIC12.34□□□□□ -0.43
TCRAP04437 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TCRAP04437 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms